CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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deaf1
(
Tetraodon nigroviridis
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSTNIG00000016068
T321932_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.955
0.789
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.955
0.789
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000002355
SAND
145
220
SVYNNELPVRCRNTSGVLYKNRLGSGGKGRCIRHSQQWFSPTEFEGLAGRASSKDWKRSIRYAGRPLLCLIQERIL
ENSTNIP00000019158
SAND
145
220
SVYNNELPVRCRNTSGVLYKNRLGSGGKGRCIRHSQQWFSPTEFEGLAGRASSKDWKRSIRYAGRPLLCLIQERIL
Links
Other
SAND
family TFs
Other
Tetraodon nigroviridis
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM039107
Anopheles coluzzii
ACOM039107
N
ACUA011343
Anopheles culicifacies
ACUA011343
N
AGAP005480
Anopheles gambiae
AGAP005480
N
AMEC001597
Anopheles melas
AMEC001597
N
AMEC022199
Anopheles melas
AMEC022199
N