GMEB1 (Tursiops truncatus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSTTRG00000013602 T321946_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.994 1.000
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.994 1.000
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.994 1.000
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.994 1.000
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.994 0.987
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.994 0.987
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.994 0.974
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.991 0.921
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.991 0.908
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.988 0.750
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.987 0.750
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.986 0.724
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.986 0.724
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.986 0.724
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.986 0.724
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.986 0.724
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.986 0.724
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.986 0.724
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.962 0.632
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000012906 SAND 89 165

Links

Other SAND family TFs
Other Tursiops truncatus TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_007350 Trichomonas vaginalis TVAG_007350 N
TVAG_009130 Trichomonas vaginalis TVAG_009130 N
TVAG_029800 Trichomonas vaginalis TVAG_029800 N
TVAG_072940 Trichomonas vaginalis TVAG_072940 N
TVAG_114620 Trichomonas vaginalis TVAG_114620 N
TVAG_125240 Trichomonas vaginalis TVAG_125240 N
TVAG_129110 Trichomonas vaginalis TVAG_129110 N
TVAG_129120 Trichomonas vaginalis TVAG_129120 N
TVAG_132500 Trichomonas vaginalis TVAG_132500 N
TVAG_132770 Trichomonas vaginalis TVAG_132770 N
TVAG_132960 Trichomonas vaginalis TVAG_132960 N
TVAG_159700 Trichomonas vaginalis TVAG_159700 N
TVAG_160450 Trichomonas vaginalis TVAG_160450 N
TVAG_161450 Trichomonas vaginalis TVAG_161450 N
TVAG_164060 Trichomonas vaginalis TVAG_164060 N
TVAG_164960 Trichomonas vaginalis TVAG_164960 N
TVAG_204520 Trichomonas vaginalis TVAG_204520 N
TVAG_205770 Trichomonas vaginalis TVAG_205770 N
TVAG_208350 Trichomonas vaginalis TVAG_208350 N
TVAG_217190 Trichomonas vaginalis TVAG_217190 N
TVAG_222670 Trichomonas vaginalis TVAG_222670 N
TVAG_232930 Trichomonas vaginalis TVAG_232930 N
TVAG_262670 Trichomonas vaginalis TVAG_262670 N
TVAG_282400 Trichomonas vaginalis TVAG_282400 N
TVAG_286640 Trichomonas vaginalis TVAG_286640 N
TVAG_290290 Trichomonas vaginalis TVAG_290290 N
TVAG_298590 Trichomonas vaginalis TVAG_298590 N
TVAG_298740 Trichomonas vaginalis TVAG_298740 N
TVAG_301700 Trichomonas vaginalis TVAG_301700 N
TVAG_313920 Trichomonas vaginalis TVAG_313920 N
TVAG_323180 Trichomonas vaginalis TVAG_323180 N
TVAG_345660 Trichomonas vaginalis TVAG_345660 N
TVAG_345950 Trichomonas vaginalis TVAG_345950 N
TVAG_353570 Trichomonas vaginalis TVAG_353570 N
TVAG_357040 Trichomonas vaginalis TVAG_357040 N
TVAG_372820 Trichomonas vaginalis TVAG_372820 N
TVAG_384790 Trichomonas vaginalis TVAG_384790 N
TVAG_388950 Trichomonas vaginalis TVAG_388950 N
TVAG_415680 Trichomonas vaginalis TVAG_415680 N
TVAG_439560 Trichomonas vaginalis TVAG_439560 N
TVAG_453000 Trichomonas vaginalis TVAG_453000 N
TVAG_488790 Trichomonas vaginalis TVAG_488790 N
TVAG_504700 Trichomonas vaginalis TVAG_504700 N
TVAG_506740 Trichomonas vaginalis TVAG_506740 N
TVAG_514650 Trichomonas vaginalis TVAG_514650 N
TVAG_515220 Trichomonas vaginalis TVAG_515220 N
TVAG_520250 Trichomonas vaginalis TVAG_520250 N
TVAG_528340 Trichomonas vaginalis TVAG_528340 N
TVAG_546680 Trichomonas vaginalis TVAG_546680 N
TVAG_547380 Trichomonas vaginalis TVAG_547380 I
TVAG_550490 Trichomonas vaginalis TVAG_550490 N
TVAG_552020 Trichomonas vaginalis TVAG_552020 N
TVAG_574310 Trichomonas vaginalis TVAG_574310 N
TVAG_574820 Trichomonas vaginalis TVAG_574820 N
TVAG_579060 Trichomonas vaginalis TVAG_579060 N
TVAG_581440 Trichomonas vaginalis TVAG_581440 N
TVAG_582290 Trichomonas vaginalis TVAG_582290 N
TVAG_582310 Trichomonas vaginalis TVAG_582310 N