Pvit_01323 (Pogona vitticeps)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pvit_01323 T322174_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.994 1.000
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.992 0.947
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.992 0.947
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.992 0.947
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.992 0.947
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.992 0.947
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.992 0.947
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.992 0.947
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.991 0.947
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.987 0.773
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.987 0.773
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.987 0.760
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.987 0.760
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.987 0.760
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.987 0.760
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.987 0.760
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.983 0.733
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.983 0.720
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.954 0.627
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_01323 SAND 88 163

Links

Other SAND family TFs
Other Pogona vitticeps TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005677 Calypte anna Aan_R005677 I 0.000
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.000
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.000
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.000
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.000
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.000
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.000
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.000
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.000
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I 0.000
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.000
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.000
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.000
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.000
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.000
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.000
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I 0.000
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I 0.000
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.000
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I 0.000
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I 0.000
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.000
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.000
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.000
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.000
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I 0.000
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I 0.000
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.000
ISCW023105 Ixodes scapularis ISCW023105 I 0.000
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.000
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.000
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.000
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.000
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.000
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.000
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.000
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.000
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.000
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.000
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.000
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.000
JDP2 Gallus gallus ENSGALG00000010322 I 0.000
JDP2 Bos taurus ENSBTAG00000009451 I 0.000
JDP2 Homo sapiens ENSG00000140044 D 0.000
JDP2 Canis familiaris ENSCAFG00000017042 I 0.000
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.000
JDP2 Felis catus ENSFCAG00000029464 I 0.000
JDP2 Equus caballus ENSECAG00000014862 I 0.000
jdp2a Danio rerio ENSDARG00000040137 I 0.000
jdp2a Takifugu rubripes ENSTRUG00000018323 I 0.000
jdp2a Oryzias latipes ENSORLG00000016515 I 0.000
jdp2b Takifugu rubripes ENSTRUG00000010344 I 0.000
jdp2b Oryzias latipes ENSORLG00000017506 I 0.000
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I 0.000
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.000
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.000
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.000
tetur01g16110 Tetranychus urticae tetur01g16110 I 0.000