Pvit_08245 (Pogona vitticeps)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Pvit_08245 T322175_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DEAF1
M11266_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_01 		0.991 0.934
DEAF1
M11267_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_02 		0.991 0.934
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_08245 SAND 119 194

Links

Other SAND family TFs
Other Pogona vitticeps TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29843.m000288 Ricinus communis 29843.m000288 N
BGIOSGA029516 Oryza indica BGIOSGA029516 N
Bo8g030620 Brassica oleracea Bo8g030620 N
Bra038936 Brassica rapa Bra038936 N
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N
F775_07408 Aegilops tauschii F775_07408 N
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N
GRMZM2G025095 Zea mays GRMZM2G025095 N
GRMZM2G168269 Zea mays GRMZM2G168269 N
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N
LPERR09G11190 Leersia perrieri LPERR09G11190 N
MBD02 Vitis vinifera VIT_11s0065g01010 N
MLOC_66533 Hordeum vulgare MLOC_66533 N
OB09G21610 Oryza brachyantha OB09G21610 N
OBART09G15030 Oryza barthii OBART09G15030 N
OGLUM09G15680 Oryza glumaepatula OGLUM09G15680 N
OLONG_025649 Oryza longistaminata OLONG_025649 N
OMERI07G04230 Oryza meridionalis OMERI07G04230 N
ONIVA09G15650 Oryza nivara ONIVA09G15650 N
OPUNC09G13490 Oryza punctata OPUNC09G13490 N
ORGLA09G0115900 Oryza glaberrima ORGLA09G0115900 N
ORUFI09G16230 Oryza rufipogon ORUFI09G16230 N
OS09G0494300 Oryza sativa OS09G0494300 N
Pavir.Ba01676 Panicum virgatum Pavir.Ba01676 N
Pavir.J30425 Panicum virgatum Pavir.J30425 N
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N
Sb02g028780 Sorghum bicolor Sb02g028780 N
Si030613m.g Setaria italica Si030613m.g N
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N
Traes_5AL_D03C2901D Triticum aestivum Traes_5AL_D03C2901D N
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N
TRIUR3_24492 Triticum urartu TRIUR3_24492 N