BGIOSGA009504 (Oryza indica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 BGIOSGA009504 T322409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.900 0.843
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.896 0.843
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.896 0.843
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.896 0.843
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA009504-PA SBP 1 51

Links

Other SBP family TFs
Other Oryza indica TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003388 Ricinus communis 29889.m003388 I 0.901
30076.m004574 Ricinus communis 30076.m004574 I 0.900
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.889
Bo4g005730 Brassica oleracea Bo4g005730 I 0.900
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.900
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.897
Bra041037 Brassica rapa Bra041037 I 0.900
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.919
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.908
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.900
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.888
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.900
Ca_03548 Cicer arietinum Ca_03548 I 0.900
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.900
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.900
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.900
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.893
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.900
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.901
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.900
F775_31139 Aegilops tauschii F775_31139 I 0.919
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.900
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.900
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.900
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.900
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.900
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.900
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.919
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.904
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.917
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.911
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.911
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.900
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.900
MDP0000180408 Malus domestica MDP0000180408 I 0.901
MDP0000180409 Malus domestica MDP0000180409 I 0.889
MDP0000919693 Malus domestica MDP0000919693 I 0.912
MDP0000919694 Malus domestica MDP0000919694 I 0.901
mgf009459m Mimulus guttatus mgf009459m I 0.900
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.919
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.900
OB03G47050 Oryza brachyantha OB03G47050 I 0.919
OB08G27190 Oryza brachyantha OB08G27190 I 0.901
OBART03G39900 Oryza barthii OBART03G39900 I 0.919
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.919
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.919
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.919
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.919
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.919
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.900
orange1.1g002868m.g Citrus sinensis orange1.1g002868m.g I 0.900
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.919
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.919
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.919
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.919
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.900
PK06791.1 Cannabis sativa PK06791.1 D 0.900
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.900
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.900
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.901
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.900
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.900
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.919
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.901
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.901
Si034095m.g Setaria italica Si034095m.g I 0.919
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.900
SPL1 Arabidopsis thaliana AT2G47070 D 0.896
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.908
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.897
SPL6 Oryza sativa OS03G0833300 I 0.919
TCM_004922 Theobroma cacao TCM_004922 I 0.900
TCM_021482 Theobroma cacao TCM_021482 I 0.901
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.908
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.919
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.916
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.919
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.919
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.901
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.900