CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPL12
(
Oryza indica
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
BGIOSGA020577
T322413_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA020577-PA
SBP
180
254
CQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARRRKP
Links
Other
SBP
family TFs
Other
Oryza indica
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC193786.3_FG005
Zea mays
AC193786.3_FG005
N
BGIOSGA000097
Oryza indica
BGIOSGA000097
N
BGIOSGA005178
Oryza indica
BGIOSGA005178
N
BRADI2G60970
Brachypodium distachyon
BRADI2G60970
N
BRADI2G61050
Brachypodium distachyon
BRADI2G61050
N
BRADI3G43250
Brachypodium distachyon
BRADI3G43250
N
F775_19529
Aegilops tauschii
F775_19529
N
F775_31854
Aegilops tauschii
F775_31854
N
GRMZM2G057413
Zea mays
GRMZM2G057413
N
LPERR01G38470
Leersia perrieri
LPERR01G38470
N
MLOC_36351
Hordeum vulgare
MLOC_36351
N
MLOC_67053
Hordeum vulgare
MLOC_67053
N
MLOC_72280
Hordeum vulgare
MLOC_72280
N
OB01G53300
Oryza brachyantha
OB01G53300
N
OBART01G44150
Oryza barthii
OBART01G44150
N
OGLUM01G48440
Oryza glumaepatula
OGLUM01G48440
N
OLONG_006457
Oryza longistaminata
OLONG_006457
N
OMERI01G40940
Oryza meridionalis
OMERI01G40940
N
ONIVA01G50120
Oryza nivara
ONIVA01G50120
N
OPUNC01G43070
Oryza punctata
OPUNC01G43070
N
ORGLA01G0380200
Oryza glaberrima
ORGLA01G0380200
N
ORUFI01G47560
Oryza rufipogon
ORUFI01G47560
N
OS01G0952800
Oryza sativa
OS01G0952800
N
Pavir.Ea04053
Panicum virgatum
Pavir.Ea04053
N
Pavir.J04771
Panicum virgatum
Pavir.J04771
N
Sb03g046090
Sorghum bicolor
Sb03g046090
N
Si002720m.g
Setaria italica
Si002720m.g
N
TRAES3BF136000020CFD_g
Triticum aestivum
TRAES3BF136000020CFD_g
N
Traes_2AL_ACBAA6A31
Triticum aestivum
Traes_2AL_ACBAA6A31
N
Traes_2BL_00608F8D6
Triticum aestivum
Traes_2BL_00608F8D6
N
Traes_2DL_865346DA2
Triticum aestivum
Traes_2DL_865346DA2
N
Traes_3AL_95403ABBA
Triticum aestivum
Traes_3AL_95403ABBA
N
TRIUR3_22165
Triticum urartu
TRIUR3_22165
N