GSMUA_Achr4G26940_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr4G26940_001 T322657_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.923 0.747
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.911 0.693
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.910 0.707
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.894 0.667
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.894 0.680
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.894 0.680
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.894 0.680
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.893 0.667
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.893 0.667
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.893 0.667
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.892 0.667
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.891 0.667
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.891 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P26940_001 SBP 114 188

Links

Other SBP family TFs
Other Musa acuminata TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21342_YDR034C Saccharomyces bayanus 21342_YDR034C I
3344_Multiple Saccharomyces mikatae 3344_Multiple I
3859_YDR034C Saccharomyces paradoxus 3859_YDR034C I
AACERI_AaceriABL099W Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL099W I
AGOS_ABL099W Ashbya gossypii AGOS_ABL099W N
CAGL0K11902g Candida glabrata CAGL0K11902g I
Ecym_5131 Eremothecium cymbalariae Ecym_5131 I
KAFR_0E01250 Kazachstania africana KAFR_0E01250 I
KLLA0_F04213g Kluyveromyces lactis KLLA0_F04213g I
KLTH0C07480g Lachancea thermotolerans KLTH0C07480g N
KLTH0C07480g Kluyveromyces thermotolerans KLTH0C07480g N
KNAG_0H01260 Kazachstania naganishii KNAG_0H01260 I
Kpol_1061p11 Vanderwaltozyma polyspora Kpol_1061p11 I
Kwal_23058 Kluyveromyces waltii Kwal_23058 N
LALA0_S02e08724g Lachancea lanzarotensis LALA0_S02e08724g N
LYS14 Saccharomyces cerevisiae YDR034C D
NDAI_0A05750 Naumovozyma dairenensis NDAI_0A05750 I
SAKL0D03586g Lachancea kluyveri SAKL0D03586g I
SKUD_203807 Saccharomyces kudriavzevii SKUD_203807 I
SU7_0595 Saccharomyces arboricola SU7_0595 I
TBLA_0I01890 Tetrapisispora blattae TBLA_0I01890 I
ZBAI_04585 Zygosaccharomyces bailii ZBAI_04585 I
ZBAI_06624 Zygosaccharomyces bailii ZBAI_06624 I
ZYRO0A03058g Zygosaccharomyces rouxii ZYRO0A03058g I