Cagra.0686s0010 (Capsella grandiflora)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Cagra.0686s0010 T323400_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL15
M07263_2.00 		Arabidopsis thaliana
DNWNTGTACGGAHN
NDTCCGTACANWNH		 Dap-seq
OMalley et al.(2016)
SPL15_col_a 		0.985 0.960
SPL15
M07264_2.00 		Arabidopsis thaliana
DNTGTACGGAHNNNN
NNNNDTCCGTACANH		 Dap-seq
OMalley et al.(2016)
SPL15_colamp_a 		0.985 0.960
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0686s0010.1.p SBP 61 135

Links

Other SBP family TFs
Other Capsella grandiflora TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL017515 Aedes aegypti AAEL017515 I
AALB006516 Anopheles albimanus AALB006516 I
AARA010573 Anopheles arabiensis AARA010573 I
AATE001768 Anopheles atroparvus AATE001768 I
ACAC_0001135701 Angiostrongylus cantonensis ACAC_0001135701 I
ACOC_0000083501 Angiostrongylus costaricensis ACOC_0000083501 I
ACUA025670 Anopheles culicifacies ACUA025670 I
ACYPI001768 Acyrthosiphon pisum ACYPI001768 I
ADAC001181 Anopheles darlingi ADAC001181 I
AEPI009411 Anopheles epiroticus AEPI009411 I
AFAF009456 Anopheles farauti AFAF009456 I
AGAP000237 Anopheles gambiae AGAP000237 I
Alligator_sinensis_CCG017770.1 Alligator sinensis Alligator_sinensis_CCG017770.1 I
ALUE_0001453301 Ascaris lumbricoides ALUE_0001453301 I
AMEM004122 Anopheles merus AMEM004122 I
AMIN005513 Anopheles minimus AMIN005513 I
ANCCEY_09873 Ancylostoma ceylanicum ANCCEY_09873 I
ANCDUO_03634 Ancylostoma duodenale ANCDUO_03634 I
Aqu1.229614 Amphimedon queenslandica Aqu1.229614 I
ASIM_0001595001 Anisakis simplex ASIM_0001595001 I
ASTEI01101 Anopheles stephensi ASTEI01101 I
ASU_12457 Ascaris suum ASU_12457 I
ATF1 Sus scrofa ENSSSCG00000016138 I
BGIBMGA006865 Bombyx mori BGIBMGA006865 I
Bm6510 Brugia malayi Bm6510 I
BTMF_0001407201 Brugia timori BTMF_0001407201 I
BXY_1632500 Bursaphelenchus xylophilus BXY_1632500 I
CAOG_04938 Capsaspora owczarzaki CAOG_04938 I
CBG13248 Caenorhabditis briggsae CBG13248 I
CBN14993 Caenorhabditis brenneri CBN14993 I
CJA03750 Caenorhabditis japonica CJA03750 I
CLEC000699 Cimex lectularius CLEC000699 I
CPIJ003805 Culex quinquefasciatus CPIJ003805 I
CpipJ_CPIJ003805 Culex pipiens CpipJ_CPIJ003805 I
CRE01024 Caenorhabditis remanei CRE01024 I
CREB1 Bos taurus ENSBTAG00000005474 I
CREB1 Canis familiaris ENSCAFG00000013510 I
CREB1 Choloepus hoffmanni ENSCHOG00000001783 I
CREB1 Callithrix jacchus ENSCJAG00000006039 I
CREB1 Cavia porcellus ENSCPOG00000010778 I
CREB1 Dasypus novemcinctus ENSDNOG00000008373 I
Creb1 Dipodomys ordii ENSDORG00000012535 I
CREB1 Equus caballus ENSECAG00000013667 I
CREB1 Erinaceus europaeus ENSEEUG00000014506 I
CREB1 Felis catus ENSFCAG00000008220 I
CREB1 Homo sapiens ENSG00000118260 D
CREB1 Gorilla gorilla ENSGGOG00000024394 I
CREB1 Loxodonta africana ENSLAFG00000013257 I
CREB1 Meleagris gallopavo ENSMGAG00000008360 I
CREB1 Myotis lucifugus ENSMLUG00000016119 I
CREB1 Macaca mulatta ENSMMUG00000022601 I
CREB1 Monodelphis domestica ENSMODG00000015970 I
Creb1 Mus musculus ENSMUSG00000025958 D
CREB1 Oryctolagus cuniculus ENSOCUG00000005427 I
CREB1 Otolemur garnettii ENSOGAG00000007121 I
CREB1 Ochotona princeps ENSOPRG00000002385 I
CREB1 Procavia capensis ENSPCAG00000007259 I
CREB1 Pan troglodytes ENSPTRG00000023623 I
CREB1 Pteropus vampyrus ENSPVAG00000011019 I
Creb1 Rattus norvegicus ENSRNOG00000013412 I
CREB1 Sorex araneus ENSSARG00000011010 I
CREB1 Tupaia belangeri ENSTBEG00000015171 I
CREB1 Tursiops truncatus ENSTTRG00000015733 I
creb1a Danio rerio ENSDARG00000053586 I
creb1a Gasterosteus aculeatus ENSGACG00000014712 I
creb1a Oryzias latipes ENSORLG00000002359 I
creb1a Tetraodon nigroviridis ENSTNIG00000008335 I
creb1a Tetraodon nigroviridis ENSTNIG00000008339 I
creb1a Takifugu rubripes ENSTRUG00000007984 I
creb1b Danio rerio ENSDARG00000093420 I
creb1b Tetraodon nigroviridis ENSTNIG00000005543 I
creb1b Takifugu rubripes ENSTRUG00000014697 I
CrebB-17A Drosophila melanogaster FBgn0265784 D
CREM Homo sapiens ENSG00000095794 D
CREM Gorilla gorilla ENSGGOG00000003999 I
CREM Macaca mulatta ENSMMUG00000022508 I
crema Danio rerio ENSDARG00000023217 I
cremb Danio rerio ENSDARG00000102899 I
crh-1 Caenorhabditis elegans WBGene00000793 I
DAPPUDRAFT_330320 Daphnia pulex DAPPUDRAFT_330320 I
DICVIV_01216 Dictyocaulus viviparus DICVIV_01216 I
DME_0000992301 Dracunculus medinensis DME_0000992301 I
ENSAMEG00000015152 Ailuropoda melanoleuca ENSAMEG00000015152 I
ENSAMXG00000012403 Astyanax mexicanus ENSAMXG00000012403 I
ENSAMXG00000015423 Astyanax mexicanus ENSAMXG00000015423 I
ENSAMXG00000024514 Astyanax mexicanus ENSAMXG00000024514 I
ENSAPLG00000006786 Anas platyrhynchos ENSAPLG00000006786 I
ENSBTAP00000007199-D1 Bos grunniens ENSBTAP00000007199-D1 I
ENSCING00000004753 Ciona intestinalis ENSCING00000004753 I
ENSCSAG00000010111 Chlorocebus sabaeus ENSCSAG00000010111 I
ENSCSAG00000011357 Chlorocebus sabaeus ENSCSAG00000011357 I
ENSCSAVG00000005696 Ciona savignyi ENSCSAVG00000005696 I
ENSFALG00000003996 Ficedula albicollis ENSFALG00000003996 I
ENSGALG00000008494 Gallus gallus ENSGALG00000008494 I
ENSLACG00000015946 Latimeria chalumnae ENSLACG00000015946 I
ENSLOCG00000004320 Lepisosteus oculatus ENSLOCG00000004320 I
ENSMEUG00000007374 Macropus eugenii ENSMEUG00000007374 I
ENSMPUG00000000485 Mustela putorius furo ENSMPUG00000000485 I
ENSNLEG00000007124 Nomascus leucogenys ENSNLEG00000007124 I
ENSNLEG00000018140 Nomascus leucogenys ENSNLEG00000018140 I
ENSOARG00000018847 Ovis aries ENSOARG00000018847 I
ENSONIG00000013380 Oreochromis niloticus ENSONIG00000013380 I
ENSONIG00000017092 Oreochromis niloticus ENSONIG00000017092 I
ENSPANG00000009083 Papio anubis ENSPANG00000009083 I
ENSPANG00000022744 Papio anubis ENSPANG00000022744 I
ENSPFOG00000013920 Poecilia formosa ENSPFOG00000013920 I
ENSPFOG00000015397 Poecilia formosa ENSPFOG00000015397 I
ENSPPYG00000002198 Pongo abelii ENSPPYG00000002198 I
ENSPPYG00000013115 Pongo abelii ENSPPYG00000013115 I
ENSPSIG00000005343 Pelodiscus sinensis ENSPSIG00000005343 I
ENSSHAG00000013905 Sarcophilus harrisii ENSSHAG00000013905 I
ENSTSYG00000006955 Tarsius syrichta ENSTSYG00000006955 I
ENSXMAG00000001305 Xiphophorus maculatus ENSXMAG00000001305 I
ENSXMAG00000007848 Xiphophorus maculatus ENSXMAG00000007848 I
EVEC_0001300501 Enterobius vermicularis EVEC_0001300501 I
GA22328 Drosophila pseudoobscura FBgn0243735 I
GD17392 Drosophila simulans FBgn0188949 I
GE17723 Drosophila yakuba FBgn0235170 I
GF22432 Drosophila ananassae FBgn0099428 I
GG19161 Drosophila erecta FBgn0111367 I
GH17726 Drosophila grimshawi FBgn0125196 I
GI15475 Drosophila mojavensis FBgn0138224 I
GK20005 Drosophila willistoni FBgn0222002 I
GL26969 Drosophila persimilis FBgn0164550 I
GM22894 Drosophila sechellia FBgn0177763 I
GPUH_0000647401 Gongylonema pulchrum GPUH_0000647401 I
HCOI00416900 Haemonchus contortus HCOI00416900 I
HCOI01263100 Haemonchus contortus HCOI01263100 I
HMEL012108 Heliconius melpomene HMEL012108 I
HPLM_0001573301 Haemonchus placei HPLM_0001573301 I
ISCW012507 Ixodes scapularis ISCW012507 I
KGM_11157 Danaus plexippus KGM_11157 I
L596_g4732 Steinernema carpocapsae L596_g4732 I
L798_07112 Zootermopsis nevadensis L798_07112 I
L889_g12216 Steinernema feltiae L889_g12216 I
L892_g3586 Steinernema scapterisci L892_g3586 I
L893_g32939 Steinernema glaseri L893_g32939 I
LCUP018087 Lucilia cuprina LCUP018087 I
LDEC007489 Leptinotarsa decemlineata LDEC007489 I
LOAG_06769 Loa loa LOAG_06769 I
MCINX000363 Melitaea cinxia MCINX000363 I
MDOA002611 Musca domestica MDOA002611 I
MESCA012340 Megaselia scalaris MESCA012340 I
Minc09689 Meloidogyne incognita Minc09689 I
ML077623a Mnemiopsis leidyi ML077623a I
NBR_0001433801 Nippostrongylus brasiliensis NBR_0001433801 I
nDi.2.2.2.g05770 Dirofilaria immitis nDi.2.2.2.g05770 I
NECAME_06452 Necator americanus NECAME_06452 I
NEMVEDRAFT_v1g242787 Nematostella vectensis NEMVEDRAFT_v1g242787 I
nLs.2.1.2.g00918 Litomosoides sigmodontis nLs.2.1.2.g00918 I
nOo.2.0.1.g00916 Onchocerca ochengi nOo.2.0.1.g00916 I
OESDEN_00693 Oesophagostomum dentatum OESDEN_00693 I
PHUM613960 Pediculus humanus PHUM613960 I
Ppa-crh-1 Pristionchus pacificus PPA24672 I
PPAI002807 Phlebotomus papatasi PPAI002807 I
PTRK_0000723500 Parastrongyloides trichosuri PTRK_0000723500 I
RPRC009923 Rhodnius prolixus RPRC009923 I
RSKR_0000611500 Rhabditophanes kr3021 RSKR_0000611500 I
Sakowv30003317m.g Saccoglossus kowalevskii Sakowv30003317m.g I
scaffold783-EXSNAP2012.2 Pristionchus exspectatus scaffold783-EXSNAP2012.2 I
SMAR010009 Strigamia maritima SMAR010009 I
SMUV_0000993401 Syphacia muris SMUV_0000993401 I
SPAL_0000284800 Strongyloides papillosus SPAL_0000284800 I
SPU_005358 Strongylocentrotus purpuratus SPU_005358 I
SSTP_0000333300 Strongyloides stercoralis SSTP_0000333300 I
SVE_1615800 Strongyloides venezuelensis SVE_1615800 I
TC008534 Tribolium castaneum TC008534 I
TCLT_0000992301 Thelazia callipaeda TCLT_0000992301 I
TCNE_0000150901 Toxocara canis TCNE_0000150901 I
TELCIR_06671 Teladorsagia circumcincta TELCIR_06671 I
tetur08g05060 Tetranychus urticae tetur08g05060 I
TriadG54968 Trichoplax adhaerens TriadG54968 I
WBGene00244541 Onchocerca volvulus WBGene00244541 I
WUBG_10037 Wuchereria bancrofti WUBG_10037 I
XP_002162729.1 Hydra magnipapillata XP_002162729.1 I
YQE_07616 Dendroctonus ponderosae YQE_07616 I