evm.TU.supercontig_27.40 (Carica papaya)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 evm.TU.supercontig_27.40 T323470_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.914 0.720
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.914 0.720
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.914 0.720
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.898 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_27.40 SBP 61 135

Links

Other SBP family TFs
Other Carica papaya TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008512 Ailuropoda melanoleuca ENSAMEG00000008512 I
ENSBTAP00000022184-D1 Bos grunniens ENSBTAP00000022184-D1 I
ENSCSAG00000002403 Chlorocebus sabaeus ENSCSAG00000002403 I
ENSMPUG00000005930 Mustela putorius furo ENSMPUG00000005930 I
ENSOARG00000000770 Ovis aries ENSOARG00000000770 I
ENSP00000337724 Macaca fascicularis ENSP00000337724 I
ENSPANG00000004921 Papio anubis ENSPANG00000004921 I
ENSPPYG00000003989 Pongo abelii ENSPPYG00000003989 I
ENSSHAG00000009268 Sarcophilus harrisii ENSSHAG00000009268 I
ENSSTOG00000027536 Ictidomys tridecemlineatus ENSSTOG00000027536 I
ENSTSYG00000010154 Tarsius syrichta ENSTSYG00000010154 I
ZNF202 Bos taurus ENSBTAG00000016684 I
ZNF202 Equus caballus ENSECAG00000024393 I
ZNF202 Choloepus hoffmanni ENSCHOG00000007537 I
ZNF202 Vicugna pacos ENSVPAG00000004840 I
ZNF202 Tursiops truncatus ENSTTRG00000011530 I
ZNF202 Tupaia belangeri ENSTBEG00000011372 I
ZNF202 Sus scrofa ENSSSCG00000015145 I
ZNF202 Pan troglodytes ENSPTRG00000004409 I
ZNF202 Otolemur garnettii ENSOGAG00000026373 I
ZNF202 Oryctolagus cuniculus ENSOCUG00000014264 I
ZNF202 Callithrix jacchus ENSCJAG00000007782 I
ZNF202 Dasypus novemcinctus ENSDNOG00000031856 I
ZNF202 Monodelphis domestica ENSMODG00000012927 I
ZNF202 Macaca mulatta ENSMMUG00000010646 I
ZNF202 Microcebus murinus ENSMICG00000007659 I
ZNF202 Loxodonta africana ENSLAFG00000008599 I
ZNF202 Gorilla gorilla ENSGGOG00000006891 I
ZNF202 Homo sapiens ENSG00000166261 D