Lus10006411.g (Linum usitatissimum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Lus10006411.g T323526_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.945 0.853
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.896 0.813
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.896 0.813
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10006411 SBP 134 208

Links

Other SBP family TFs
Other Linum usitatissimum TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_05630 Beauveria bassiana BBA_05630 N 0.000
CCM_04623 Cordyceps militaris CCM_04623 N 0.000
CFIO01_08239 Colletotrichum fioriniae CFIO01_08239 N 0.000
CGGC5_5177 Colletotrichum gloeosporioides CGGC5_5177 N 0.000
CH063_01997 Colletotrichum higginsianum CH063_01997 N 0.000
Cob_09844 Colletotrichum orbiculare Cob_09844 N 0.000
e_gw1.2.1437.1 Nectria haematococca e_gw1.2.1437.1 N 0.000
FFUJ_06104 Fusarium fujikuroi FFUJ_06104 N 0.000
fgenesh1_kg.C_scaffold_15000017 Cryphonectria parasitica fgenesh1_kg.C_scaffold_15000017 N 0.000
FGRRES_08397 Fusarium graminearum FGRRES_08397 N 0.000
FOXG_03196 Fusarium oxysporum FOXG_03196 N 0.000
FPSE_09014 Fusarium pseudograminearum FPSE_09014 N 0.000
FVEG_02065 Fusarium verticillioides FVEG_02065 N 0.000
GLRG_05399 Colletotrichum graminicola GLRG_05399 N 0.000
MAC_03499 Metarhizium acridum MAC_03499 N 0.000
MAJ_00122 Metarhizium majus MAJ_00122 N 0.000
MAM_00759 Metarhizium album MAM_00759 N 0.000
MANI_028548 Metarhizium anisopliae MANI_028548 N 0.000
MBR_02516 Metarhizium brunneum MBR_02516 N 0.000
MGU_00497 Metarhizium guizhouense MGU_00497 N 0.000
NechaG35170 Fusarium solani NechaG35170 N 0.000
OCS_03494 Ophiocordyceps sinensis OCS_03494 N 0.000
S40285_07596 Stachybotrys chlorohalonata S40285_07596 N 0.000
S40288_03002 Stachybotrys chartarum S40288_03002 N 0.000
TRIATDRAFT_284947 Trichoderma atroviride TRIATDRAFT_284947 N 0.000
TRIREDRAFT_79673 Trichoderma reesei TRIREDRAFT_79673 N 0.000
TRIVIDRAFT_76678 Trichoderma virens TRIVIDRAFT_76678 N 0.000
VDAG_05574 Verticillium dahliae VDAG_05574 N 0.000
VHEMI06839 Torrubiella hemipterigena VHEMI06839 N 0.000
X797_000555 Metarhizium robertsii X797_000555 N 0.000