smad3b (Tetraodon nigroviridis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSTNIG00000008432 T324993_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.901 0.901
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.901 0.901
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.901 0.901
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.901 0.901
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.901 0.901
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.901 0.901
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.901 0.901
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.901 0.901
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.743 0.743
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.743 0.743
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.723 0.723
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.723 0.723
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.723 0.723
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.723 0.723
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.723 0.723
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.713 0.713
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.713 0.713
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.713 0.713
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000011268 SMAD 31 131

Links

Other SMAD family TFs
Other Tetraodon nigroviridis TFs

411 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014934 Calypte anna Aan_R014934 N
Afo_R006068 Aptenodytes forsteri Afo_R006068 N
Alligator_sinensis_CCG003358.1 Alligator sinensis Alligator_sinensis_CCG003358.1 N
Cmyd_10014647 Chelonia mydas Cmyd_10014647 N
ENSAMXG00000004878 Astyanax mexicanus ENSAMXG00000004878 N
ENSEEUG00000012976 Erinaceus europaeus ENSEEUG00000012976 N
ENSFALG00000012636 Ficedula albicollis ENSFALG00000012636 N
ENSGALG00000016087 Gallus gallus ENSGALG00000016087 N
ENSGMOG00000017980 Gadus morhua ENSGMOG00000017980 N
ENSLACG00000014652 Latimeria chalumnae ENSLACG00000014652 N
ENSLOCG00000002435 Lepisosteus oculatus ENSLOCG00000002435 N
ENSLOCG00000006834 Lepisosteus oculatus ENSLOCG00000006834 N
ENSMPUG00000007635 Mustela putorius furo ENSMPUG00000007635 N
ENSOARG00000011843 Ovis aries ENSOARG00000011843 N
ENSONIG00000017557 Oreochromis niloticus ENSONIG00000017557 N
ENSPFOG00000011684 Poecilia formosa ENSPFOG00000011684 N
ENSPPYG00000012296 Pongo abelii ENSPPYG00000012296 N
ENSPSIG00000002615 Pelodiscus sinensis ENSPSIG00000002615 N
ENSXMAG00000005499 Xiphophorus maculatus ENSXMAG00000005499 N
fbxo41 Tetraodon nigroviridis ENSTNIG00000018046 N
fbxo41 Takifugu rubripes ENSTRUG00000001696 N
FBXO41 Anolis carolinensis ENSACAG00000000364 N
fbxo41 Xenopus tropicalis XB-GENE-966908 N
FBXO41 Taeniopygia guttata ENSTGUG00000015356 N
FBXO41 Sorex araneus ENSSARG00000011507 N
Fbxo41 Rattus norvegicus ENSRNOG00000033202 N
fbxo41 Oryzias latipes ENSORLG00000006366 N
FBXO41 Oryctolagus cuniculus ENSOCUG00000002433 N
Fbxo41 Mus musculus ENSMUSG00000047013 N
FBXO41 Monodelphis domestica ENSMODG00000016969 N
FBXO41 Meleagris gallopavo ENSMGAG00000013309 N
fbxo41 Gasterosteus aculeatus ENSGACG00000017614 N
FBXO41 Felis catus ENSFCAG00000009398 N
Ogr04473 Ophisaurus gracilis Ogr04473 N
Ogr08674 Ophisaurus gracilis Ogr08674 N
Pvit_16847 Pogona vitticeps Pvit_16847 N
ZNF365 Sorex araneus ENSSARG00000009027 N
ZNF365 Homo sapiens ENSG00000138311 N