Ocbimv22036741m.g (Octopus bimaculoides)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Ocbimv22036741m.g T325367_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.790 0.790
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.790 0.790
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.790 0.790
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.790 0.790
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.790 0.790
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.790 0.790
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.790 0.790
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.790 0.790
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.726 0.726
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.726 0.726
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.726 0.726
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.726 0.726
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.726 0.726
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.726 0.726
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.726 0.726
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.726 0.726
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.726 0.726
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.710 0.710
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22036741m.p SMAD 1 62

Links

Other SMAD family TFs
Other Octopus bimaculoides TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI70264 Xenopus laevis AAI70264 N
Aan_R008628 Calypte anna Aan_R008628 N
Aan_R012927 Calypte anna Aan_R012927 N
Afo_R001804 Aptenodytes forsteri Afo_R001804 N
Afo_R010888 Aptenodytes forsteri Afo_R010888 N
Afo_R015783 Aptenodytes forsteri Afo_R015783 N
Alligator_sinensis_CCG018588.1 Alligator sinensis Alligator_sinensis_CCG018588.1 N
Brh_R002741 Buceros rhinoceros Brh_R002741 N
Cflo_03590--XP_394358.3_APIME Camponotus floridanus Cflo_03590--XP_394358.3_APIME N
Cmyd_10014849 Chelonia mydas Cmyd_10014849 N
ENSAMEG00000002048 Ailuropoda melanoleuca ENSAMEG00000002048 N
ENSAMEG00000014764 Ailuropoda melanoleuca ENSAMEG00000014764 N
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I
ENSAMXG00000001873 Astyanax mexicanus ENSAMXG00000001873 N
ENSAMXG00000002473 Astyanax mexicanus ENSAMXG00000002473 N
ENSAMXG00000013383 Astyanax mexicanus ENSAMXG00000013383 N
ENSAPLG00000003822 Anas platyrhynchos ENSAPLG00000003822 N
ENSAPLG00000007386 Anas platyrhynchos ENSAPLG00000007386 N
ENSAPLG00000016052 Anas platyrhynchos ENSAPLG00000016052 N
ENSBTAP00000038860-D1 Bos grunniens ENSBTAP00000038860-D1 N
ENSCSAG00000006922 Chlorocebus sabaeus ENSCSAG00000006922 N
ENSCSAG00000014731 Chlorocebus sabaeus ENSCSAG00000014731 N
ENSCSAG00000016796 Chlorocebus sabaeus ENSCSAG00000016796 N
ENSFALG00000002053 Ficedula albicollis ENSFALG00000002053 N
ENSFALG00000010174 Ficedula albicollis ENSFALG00000010174 N
ENSFALG00000010354 Ficedula albicollis ENSFALG00000010354 N
ENSGACG00000012816 Gasterosteus aculeatus ENSGACG00000012816 N
ENSGACG00000013255 Gasterosteus aculeatus ENSGACG00000013255 N
ENSGMOG00000006285 Gadus morhua ENSGMOG00000006285 N
ENSGMOG00000009083 Gadus morhua ENSGMOG00000009083 N
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I
ENSLACG00000014372 Latimeria chalumnae ENSLACG00000014372 N
ENSLAFG00000004212 Loxodonta africana ENSLAFG00000004212 N
ENSLOCG00000005236 Lepisosteus oculatus ENSLOCG00000005236 N
ENSLOCG00000005847 Lepisosteus oculatus ENSLOCG00000005847 N
ENSLOCG00000017216 Lepisosteus oculatus ENSLOCG00000017216 N
ENSMMUP00000012198 Macaca fascicularis ENSMMUP00000012198 N
ENSMPUG00000006922 Mustela putorius furo ENSMPUG00000006922 N
ENSMPUG00000008741 Mustela putorius furo ENSMPUG00000008741 N
ENSMPUG00000012946 Mustela putorius furo ENSMPUG00000012946 N
ENSNLEG00000000678 Nomascus leucogenys ENSNLEG00000000678 N
ENSNLEG00000008466 Nomascus leucogenys ENSNLEG00000008466 N
ENSNLEG00000010244 Nomascus leucogenys ENSNLEG00000010244 N
ENSOANG00000009861 Ornithorhynchus anatinus ENSOANG00000009861 N
ENSOARG00000007966 Ovis aries ENSOARG00000007966 N
ENSOARG00000013407 Ovis aries ENSOARG00000013407 N
ENSONIG00000000499 Oreochromis niloticus ENSONIG00000000499 N
ENSONIG00000009529 Oreochromis niloticus ENSONIG00000009529 N
ENSONIG00000011665 Oreochromis niloticus ENSONIG00000011665 N
ENSONIG00000018694 Oreochromis niloticus ENSONIG00000018694 N
ENSP00000276480 Macaca fascicularis ENSP00000276480 N
ENSP00000276480-D1 Bos grunniens ENSP00000276480-D1 N
ENSP00000327465 Macaca fascicularis ENSP00000327465 N
ENSPANG00000005639 Papio anubis ENSPANG00000005639 N
ENSPANG00000005908 Papio anubis ENSPANG00000005908 N
ENSPANG00000009233 Papio anubis ENSPANG00000009233 N
ENSPFOG00000002613 Poecilia formosa ENSPFOG00000002613 N
ENSPFOG00000014046 Poecilia formosa ENSPFOG00000014046 N
ENSPFOG00000016047 Poecilia formosa ENSPFOG00000016047 N
ENSPFOG00000017045 Poecilia formosa ENSPFOG00000017045 N
ENSPPYG00000011263 Pongo abelii ENSPPYG00000011263 N
ENSPPYG00000012686 Pongo abelii ENSPPYG00000012686 N
ENSPSIG00000005126 Pelodiscus sinensis ENSPSIG00000005126 N
ENSPSIG00000010265 Pelodiscus sinensis ENSPSIG00000010265 N
ENSPSIG00000011125 Pelodiscus sinensis ENSPSIG00000011125 N
ENSSHAG00000012193 Sarcophilus harrisii ENSSHAG00000012193 N
ENSSHAG00000015142 Sarcophilus harrisii ENSSHAG00000015142 N
ENSSHAG00000015433 Sarcophilus harrisii ENSSHAG00000015433 N
ENSSTOG00000001345 Ictidomys tridecemlineatus ENSSTOG00000001345 N
ENSSTOG00000008133 Ictidomys tridecemlineatus ENSSTOG00000008133 N
ENSTGUG00000007315 Taeniopygia guttata ENSTGUG00000007315 N
ENSTGUG00000012971 Taeniopygia guttata ENSTGUG00000012971 N
ENSTNIG00000004354 Tetraodon nigroviridis ENSTNIG00000004354 N
ENSTSYG00000006016 Tarsius syrichta ENSTSYG00000006016 N
ENSTSYG00000010425 Tarsius syrichta ENSTSYG00000010425 N
ENSXMAG00000002367 Xiphophorus maculatus ENSXMAG00000002367 N
ENSXMAG00000012857 Xiphophorus maculatus ENSXMAG00000012857 N
ENSXMAG00000018975 Xiphophorus maculatus ENSXMAG00000018975 N
estExt_fgenesh2_pg.C_1230027 Branchiostoma floridae estExt_fgenesh2_pg.C_1230027 N
GB48919 Apis mellifera GB48919 N
Gfo_R002934 Geospiza fortis Gfo_R002934 N
Gfo_R005271 Geospiza fortis Gfo_R005271 N
Gfo_R012653 Geospiza fortis Gfo_R012653 N
L798_00492 Zootermopsis nevadensis L798_00492 N
LotgiG162409 Lottia gigantea LotgiG162409 N
Myotis_brandtii_MYT1L_10020908 Myotis brandtii Myotis_brandtii_MYT1L_10020908 N
Myotis_brandtii_MYT1_10023423 Myotis brandtii Myotis_brandtii_MYT1_10023423 N
Myotis_brandtii_ST18_10012485 Myotis brandtii Myotis_brandtii_ST18_10012485 N
MYT1 Anolis carolinensis ENSACAG00000006249 N
MYT1 Bos taurus ENSBTAG00000006352 N
MYT1 Canis familiaris ENSCAFG00000013222 N
MYT1 Cavia porcellus ENSCPOG00000006790 N
MYT1 Dasypus novemcinctus ENSDNOG00000032037 N
Myt1 Dipodomys ordii ENSDORG00000006425 N
MYT1 Equus caballus ENSECAG00000013810 N
MYT1 Felis catus ENSFCAG00000001189 N
MYT1 Homo sapiens ENSG00000196132 N
MYT1 Gallus gallus ENSGALG00000005932 N
MYT1 Gorilla gorilla ENSGGOG00000006335 N
MYT1 Loxodonta africana ENSLAFG00000022251 N
MYT1 Meleagris gallopavo ENSMGAG00000006569 N
MYT1 Microcebus murinus ENSMICG00000003327 N
MYT1 Myotis lucifugus ENSMLUG00000007626 N
MYT1 Macaca mulatta ENSMMUG00000002315 N
MYT1 Monodelphis domestica ENSMODG00000017076 N
Myt1 Mus musculus ENSMUSG00000010505 N
MYT1 Ornithorhynchus anatinus ENSOANG00000004914 N
MYT1 Oryctolagus cuniculus ENSOCUG00000024866 N
MYT1 Otolemur garnettii ENSOGAG00000011473 N
MYT1 Ochotona princeps ENSOPRG00000015226 N
MYT1 Pan troglodytes ENSPTRG00000032477 N
MYT1 Pteropus vampyrus ENSPVAG00000017398 N
Myt1 Rattus norvegicus ENSRNOG00000017346 N
MYT1 Takifugu rubripes ENSTRUG00000002124 N
MYT1 Tursiops truncatus ENSTTRG00000013408 N
myt1.S Xenopus laevis XB-GENE-1009978 N
myt1a Danio rerio ENSDARG00000074030 N
myt1a Oryzias latipes ENSORLG00000020139 N
myt1a Takifugu rubripes ENSTRUG00000007068 N
myt1b Danio rerio ENSDARG00000102879 N
myt1b Gasterosteus aculeatus ENSGACG00000013224 N
myt1b Oryzias latipes ENSORLG00000002252 N
myt1b Tetraodon nigroviridis ENSTNIG00000003105 N
MYT1L Anolis carolinensis ENSACAG00000005667 N
MYT1L Canis familiaris ENSCAFG00000003240 N
MYT1L Callithrix jacchus ENSCJAG00000007286 N
MYT1L Cavia porcellus ENSCPOG00000013246 N
MYT1L Dasypus novemcinctus ENSDNOG00000037275 N
MYT1L Equus caballus ENSECAG00000014657 N
MYT1L Erinaceus europaeus ENSEEUG00000013615 N
MYT1L Felis catus ENSFCAG00000013984 N
MYT1L Homo sapiens ENSG00000186487 I
MYT1L Gallus gallus ENSGALG00000016384 N
MYT1L Gorilla gorilla ENSGGOG00000026335 N
MYT1L Loxodonta africana ENSLAFG00000002751 N
MYT1L Meleagris gallopavo ENSMGAG00000013972 N
MYT1L Myotis lucifugus ENSMLUG00000012642 N
MYT1L Macaca mulatta ENSMMUG00000009310 I
MYT1L Monodelphis domestica ENSMODG00000014378 N
Myt1l Mus musculus ENSMUSG00000061911 N
MYT1L Oryctolagus cuniculus ENSOCUG00000016764 N
MYT1L Otolemur garnettii ENSOGAG00000010219 N
MYT1L Procavia capensis ENSPCAG00000015124 N
MYT1L Pan troglodytes ENSPTRG00000011611 N
Myt1l Rattus norvegicus ENSRNOG00000004269 N
MYT1L Sorex araneus ENSSARG00000012319 N
MYT1L Sus scrofa ENSSSCG00000029334 N
MYT1L Takifugu rubripes ENSTRUG00000003414 N
MYT1L Tursiops truncatus ENSTTRG00000008589 N
myt1la Danio rerio ENSDARG00000008209 N
myt1la Gasterosteus aculeatus ENSGACG00000011952 N
myt1la Oryzias latipes ENSORLG00000018130 N
myt1la Tetraodon nigroviridis ENSTNIG00000010716 N
myt1la Takifugu rubripes ENSTRUG00000015790 N
Ogr14932 Ophisaurus gracilis Ogr14932 N
Pvit_03612 Pogona vitticeps Pvit_03612 N
Pvit_15314 Pogona vitticeps Pvit_15314 N
Pvit_18506 Pogona vitticeps Pvit_18506 N
Sakowv30043989m.g Saccoglossus kowalevskii Sakowv30043989m.g N
SPU_023941 Strongylocentrotus purpuratus SPU_023941 N
ST18 Anolis carolinensis ENSACAG00000017961 N
ST18 Bos taurus ENSBTAG00000005560 N
ST18 Canis familiaris ENSCAFG00000006762 N
ST18 Choloepus hoffmanni ENSCHOG00000010565 N
ST18 Callithrix jacchus ENSCJAG00000014630 N
ST18 Cavia porcellus ENSCPOG00000005486 N
ST18 Dasypus novemcinctus ENSDNOG00000009682 N
St18 Dipodomys ordii ENSDORG00000002635 N
ST18 Equus caballus ENSECAG00000011546 N
ST18 Echinops telfairi ENSETEG00000003477 N
ST18 Felis catus ENSFCAG00000008556 N
ST18 Homo sapiens ENSG00000147488 I
ST18 Gasterosteus aculeatus ENSGACG00000017947 N
ST18 Gallus gallus ENSGALG00000015254 N
ST18 Gorilla gorilla ENSGGOG00000001223 N
ST18 Meleagris gallopavo ENSMGAG00000010851 N
ST18 Microcebus murinus ENSMICG00000003705 N
ST18 Myotis lucifugus ENSMLUG00000013211 N
ST18 Macaca mulatta ENSMMUG00000008439 N
ST18 Monodelphis domestica ENSMODG00000009635 N
St18 Mus musculus ENSMUSG00000033740 N
ST18 Ornithorhynchus anatinus ENSOANG00000007275 N
ST18 Oryctolagus cuniculus ENSOCUG00000013284 N
ST18 Otolemur garnettii ENSOGAG00000012050 N
ST18 Ochotona princeps ENSOPRG00000001335 N
ST18 Oryzias latipes ENSORLG00000017500 N
ST18 Pan troglodytes ENSPTRG00000020245 N
ST18 Pteropus vampyrus ENSPVAG00000013501 N
St18 Rattus norvegicus ENSRNOG00000006200 N
ST18 Sus scrofa ENSSSCG00000006266 N
ST18 Tupaia belangeri ENSTBEG00000016040 N
ST18 Taeniopygia guttata ENSTGUG00000010944 N
ST18 Tetraodon nigroviridis ENSTNIG00000008501 N
ST18 Takifugu rubripes ENSTRUG00000006078 N
ST18 Tursiops truncatus ENSTTRG00000015387 N
Tal_R003131 Tyto alba Tal_R003131 N
XP_002934158 Xenopus tropicalis XP_002934158 N
XP_002936343 Xenopus tropicalis XP_002936343 N
XP_002942428 Xenopus tropicalis XP_002942428 N