smad9.S (Xenopus laevis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 XB-GENE-865114 T325441_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.961 0.961
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.961 0.961
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.961 0.961
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.931 0.931
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.931 0.931
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.912 0.912
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.912 0.912
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.902 0.902
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.902 0.902
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.902 0.902
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.902 0.902
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.706 0.706
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.706 0.706
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.706 0.706
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.706 0.706
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.706 0.706
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.706 0.706
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.706 0.706
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH57741 SMAD 34 135

Links

Other SMAD family TFs
Other Xenopus laevis TFs

431 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000019664 Chlorocebus sabaeus ENSCSAG00000019664 I
ENSMPUG00000008378 Mustela putorius furo ENSMPUG00000008378 I
ENSNLEG00000011103 Nomascus leucogenys ENSNLEG00000011103 I
ENSP00000409872 Macaca fascicularis ENSP00000409872 I
ENSPANG00000012245 Papio anubis ENSPANG00000012245 I
ENSPPYG00000010493 Pongo abelii ENSPPYG00000010493 I
ENSTSYG00000010913 Tarsius syrichta ENSTSYG00000010913 I
Myotis_brandtii_ZNF274_10003422 Myotis brandtii Myotis_brandtii_ZNF274_10003422 I
Zfp110 Rattus norvegicus ENSRNOG00000031328 I
Zfp110 Mus musculus ENSMUSG00000058638 I
ZNF274 Sorex araneus ENSSARG00000001423 I
ZNF274 Sus scrofa ENSSSCG00000003998 I
ZNF274 Tupaia belangeri ENSTBEG00000006394 I
ZNF274 Pteropus vampyrus ENSPVAG00000002938 I
ZNF274 Pan troglodytes ENSPTRG00000011583 I
ZNF274 Tursiops truncatus ENSTTRG00000013077 I
ZNF274 Otolemur garnettii ENSOGAG00000005637 I
ZNF274 Ochotona princeps ENSOPRG00000007383 I
ZNF274 Bos taurus ENSBTAG00000013353 I
ZNF274 Macaca mulatta ENSMMUG00000020505 I
ZNF274 Microcebus murinus ENSMICG00000017855 I
ZNF274 Gorilla gorilla ENSGGOG00000004688 I
ZNF274 Homo sapiens ENSG00000171606 D
ZNF274 Erinaceus europaeus ENSEEUG00000008228 I
ZNF274 Equus caballus ENSECAG00000007526 I
ZNF274 Dasypus novemcinctus ENSDNOG00000032910 I
ZNF544 Callithrix jacchus ENSCJAG00000000329 I