ASU_05356 (Ascaris suum)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 ASU_05356 T325601_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NfI
M03968_2.00 		Drosophila melanogaster
YTGGCDNNNHGCCAR
YTGGCDNNNHGCCAR		 SELEX
Nitta et al.(2015)
NfI_1 		0.835 0.835
NFIC
M05745_2.00 		Homo sapiens
NTTGGCNNNNTGCCARN
NYTGGCANNNNGCCAAN		 SELEX
Yin et al.(2017)
NFIC_FL_HT-SELEX 		0.835 0.835
NFIC
M08164_2.00 		Homo sapiens
NNCTTGGCANN
NNTGCCAAGNN		 ChIP-seq
Mathelier et al.(2014)
MA0161.2 		0.835 0.835
NFIC
M09378_2.00 		Homo sapiens
BYTGGMHBYNDKCCMRV
BYKGGMHNRVDKCCARV		 Misc
Kulakovskiy et al.(2013)
NFIC_HUMAN.H11MO.0.A 		0.835 0.835
Nfic
M09385_2.00 		Mus musculus
NBYTGGCWN
NWGCCARVN		 Misc
Kulakovskiy et al.(2013)
NFIC_MOUSE.H11MO.0.A 		0.835 0.835
NFIC
M09635_2.00 		Homo sapiens
BYTGSCAV
BTGSCARV		 Misc
Heinz et al.(2010)
LNCaP-NF1_Unpublished 		0.835 0.835
NFIC
M09636_2.00 		Homo sapiens
BYTGGCHNNNDGCCAR
YTGGCHNNNDGCCARV		 Misc
Heinz et al.(2010)
LNCAP-NF1_Unpublished 		0.835 0.835
NFIC
M11278_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CTF1_01 		0.835 0.835
NFIC
M11279_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1C_Q6 		0.835 0.835
NFIC
M05746_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIC_FL_Methyl-HT-SELEX 		0.835 0.835
NFIA
M03480_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIA_1 		0.769 0.769
NFIA
M03481_2.00 		Homo sapiens
NNTGCCAANN
NNTTGGCANN		 SELEX
Jolma et al.(2013)
NFIA_2 		0.769 0.769
NFIA
M09379_2.00 		Homo sapiens
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_HUMAN.H11MO.0.C 		0.769 0.769
Nfia
M09383_2.00 		Mus musculus
YTGGCWNYNDGCCAD
HTGGCHNRNWGCCAR		 Misc
Kulakovskiy et al.(2013)
NFIA_MOUSE.H11MO.0.C 		0.769 0.769
NFIA
M11282_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1A_Q6_01 		0.769 0.769
Nfia
M11291_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFIA_02 		0.769 0.769
NFIB
M03479_2.00 		Homo sapiens
YTGGCANNNTGCCAA
TTGGCANNNTGCCAR		 SELEX
Jolma et al.(2013)
NFIB_1 		0.736 0.736
NFIX
M03475_2.00 		Homo sapiens
YTGGCNNNNTGCCAA
TTGGCANNNNGCCAR		 SELEX
Jolma et al.(2013)
NFIX_1 		0.736 0.736
NFIX
M03476_2.00 		Homo sapiens
NYTGGCDNN
NNHGCCARN		 SELEX
Jolma et al.(2013)
NFIX_2 		0.736 0.736
NFIX
M03477_2.00 		Homo sapiens
NYTGGCWNN
NNWGCCARN		 SELEX
Jolma et al.(2013)
NFIX_3 		0.736 0.736
NFIX
M03478_2.00 		Homo sapiens
TTGGCANNNTGCCAR
YTGGCANNNTGCCAA		 SELEX
Jolma et al.(2013)
NFIX_4 		0.736 0.736
NFIB
M05747_2.00 		Homo sapiens
NYTGGCNNNNYGCCARN
NYTGGCRNNNNGCCARN		 SELEX
Yin et al.(2017)
NFIB_FL_HT-SELEX 		0.736 0.736
NFIX
M05741_2.00 		Homo sapiens
NHTGGCDNNNTGCCADN
NHTGGCANNNHGCCADN		 SELEX
Yin et al.(2017)
NFIX_FL_HT-SELEX 		0.736 0.736
Nfib
M09381_2.00 		Mus musculus
BVWGCCARV
BYTGGCWBV		 Misc
Kulakovskiy et al.(2013)
NFIB_MOUSE.H11MO.0.C 		0.736 0.736
NFIB
M11280_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6_01 		0.736 0.736
NFIB
M11281_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NF1B_Q6 		0.736 0.736
NFIB
M05748_2.00 		Homo sapiens
NTTGGCDNNNTGCCARN
NYTGGCANNNHGCCAAN		 SELEX
Yin et al.(2017)
NFIB_FL_Methyl-HT-SELEX 		0.736 0.736
NFIX
M05742_2.00 		Homo sapiens
NYTGGCDNNNTGCCARN
NYTGGCANNNHGCCARN		 SELEX
Yin et al.(2017)
NFIX_FL_Methyl-HT-SELEX 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_05356 SMAD 78 182

Links

Other SMAD family TFs
Other Ascaris suum TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004871.1 Alligator sinensis Alligator_sinensis_CCG004871.1 N
CapteG164570 Capitella teleta CapteG164570 N
CG13296 Drosophila melanogaster FBgn0035687 N
CGI_10026455 Crassostrea gigas CGI_10026455 N
Cmyd_10002903 Chelonia mydas Cmyd_10002903 N
DAPPUDRAFT_111472 Daphnia pulex DAPPUDRAFT_111472 N
ENSAMEG00000008949 Ailuropoda melanoleuca ENSAMEG00000008949 N
ENSAMXG00000008885 Astyanax mexicanus ENSAMXG00000008885 N
ENSAPLG00000007652 Anas platyrhynchos ENSAPLG00000007652 N
ENSCSAG00000014622 Chlorocebus sabaeus ENSCSAG00000014622 N
ENSDORG00000003558 Dipodomys ordii ENSDORG00000003558 N
ENSGMOG00000006125 Gadus morhua ENSGMOG00000006125 N
ENSLACG00000008814 Latimeria chalumnae ENSLACG00000008814 N
ENSLOCG00000017084 Lepisosteus oculatus ENSLOCG00000017084 N
ENSMICG00000001097 Microcebus murinus ENSMICG00000001097 N
ENSMPUG00000001648 Mustela putorius furo ENSMPUG00000001648 N
ENSNLEG00000013845 Nomascus leucogenys ENSNLEG00000013845 N
ENSOARG00000011775 Ovis aries ENSOARG00000011775 N
ENSONIG00000000112 Oreochromis niloticus ENSONIG00000000112 N
ENSP00000352819 Macaca fascicularis ENSP00000352819 N
ENSP00000352819-D1 Bos grunniens ENSP00000352819-D1 N
ENSPANG00000017638 Papio anubis ENSPANG00000017638 N
ENSPFOG00000019371 Poecilia formosa ENSPFOG00000019371 N
ENSPPYG00000016866 Pongo abelii ENSPPYG00000016866 N
ENSPSIG00000002567 Pelodiscus sinensis ENSPSIG00000002567 N
ENSSHAG00000013340 Sarcophilus harrisii ENSSHAG00000013340 N
ENSSTOG00000016567 Ictidomys tridecemlineatus ENSSTOG00000016567 N
ENSXMAG00000002547 Xiphophorus maculatus ENSXMAG00000002547 N
GA12179 Drosophila pseudoobscura FBgn0072227 N
GB51085 Apis mellifera GB51085 N
GD13944 Drosophila simulans FBgn0185640 N
GE21548 Drosophila yakuba FBgn0238803 N
GF23530 Drosophila ananassae FBgn0100524 N
GG15330 Drosophila erecta FBgn0107582 N
GK17273 Drosophila willistoni FBgn0219272 N
GL15563 Drosophila persimilis FBgn0153167 N
GM14767 Drosophila sechellia FBgn0169688 N
gw.79.7.1 Branchiostoma floridae gw.79.7.1 N
HelroG144862 Helobdella robusta HelroG144862 N
HHAL009600-PA Halyomorpha halys HHAL009600-PA N
L798_05013 Zootermopsis nevadensis L798_05013 N
LotgiG130257 Lottia gigantea LotgiG130257 N
MESCA000924 Megaselia scalaris MESCA000924 N
NEMVEDRAFT_v1g66221 Nematostella vectensis NEMVEDRAFT_v1g66221 N
NV14899 Nasonia vitripennis NV14899 N
Ocbimv22009191m.g Octopus bimaculoides Ocbimv22009191m.g N
Ogr12758 Ophisaurus gracilis Ogr12758 N
PHUM605290 Pediculus humanus PHUM605290 N
prdm13 Xenopus tropicalis XB-GENE-960155 N
prdm13 Takifugu rubripes ENSTRUG00000000334 N
PRDM13 Bos taurus ENSBTAG00000006095 N
PRDM13 Canis familiaris ENSCAFG00000023314 N
PRDM13 Choloepus hoffmanni ENSCHOG00000011613 N
PRDM13 Callithrix jacchus ENSCJAG00000001421 N
prdm13 Danio rerio ENSDARG00000078701 N
PRDM13 Dasypus novemcinctus ENSDNOG00000006520 N
PRDM13 Echinops telfairi ENSETEG00000004709 N
PRDM13 Felis catus ENSFCAG00000010288 N
PRDM13 Homo sapiens ENSG00000112238 N
prdm13 Gasterosteus aculeatus ENSGACG00000005032 N
PRDM13 Gorilla gorilla ENSGGOG00000006947 N
PRDM13 Loxodonta africana ENSLAFG00000012439 N
PRDM13 Oryctolagus cuniculus ENSOCUG00000003216 N
PRDM13 Tursiops truncatus ENSTTRG00000004705 N
prdm13 Tetraodon nigroviridis ENSTNIG00000006867 N
PRDM13 Sus scrofa ENSSSCG00000004354 N
Prdm13 Rattus norvegicus ENSRNOG00000007683 N
PRDM13 Pteropus vampyrus ENSPVAG00000001695 N
PRDM13 Pan troglodytes ENSPTRG00000018445 N
prdm13 Oryzias latipes ENSORLG00000002129 N
PRDM13 Otolemur garnettii ENSOGAG00000031927 N
PRDM13 Myotis lucifugus ENSMLUG00000001899 N
Prdm13 Mus musculus ENSMUSG00000040478 N
PRDM13 Monodelphis domestica ENSMODG00000018089 N
RPRC014451 Rhodnius prolixus RPRC014451 N
Sakowv30027334m.g Saccoglossus kowalevskii Sakowv30027334m.g N
SMAR008272 Strigamia maritima SMAR008272 N
SMAR010327 Strigamia maritima SMAR010327 N
SPU_012050 Strongylocentrotus purpuratus SPU_012050 N
TC014373 Tribolium castaneum TC014373 N
YQE_11778 Dendroctonus ponderosae YQE_11778 N