ENSTNIG00000000216 (Tetraodon nigroviridis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTNIG00000000216 T329235_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000000935 Sox 21 70

Links

Other Sox family TFs
Other Tetraodon nigroviridis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28353.m000054 Ricinus communis 28353.m000054 I
30146.m003535 Ricinus communis 30146.m003535 I
30174.m008790 Ricinus communis 30174.m008790 I
AC187157.4_FG001 Zea mays AC187157.4_FG001 I
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I
BGIOSGA002184 Oryza indica BGIOSGA002184 I
BGIOSGA016882 Oryza indica BGIOSGA016882 I
BGIOSGA016883 Oryza indica BGIOSGA016883 I
BGIOSGA016884 Oryza indica BGIOSGA016884 I
Bo3g028500 Brassica oleracea Bo3g028500 I
Bo3g037480 Brassica oleracea Bo3g037480 I
Bo3g171090 Brassica oleracea Bo3g171090 I
Bo4g024220 Brassica oleracea Bo4g024220 I
Bo4g195280 Brassica oleracea Bo4g195280 I
Bo7g115860 Brassica oleracea Bo7g115860 I
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I
Bostr.26326s0067 Boechera stricta Bostr.26326s0067 I
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I
Bra000366 Brassica rapa Bra000366 I
Bra004878 Brassica rapa Bra004878 I
Bra023026 Brassica rapa Bra023026 I
Bra034273 Brassica rapa Bra034273 I
Bra034535 Brassica rapa Bra034535 I
Bra037041 Brassica rapa Bra037041 I
Bra040333 Brassica rapa Bra040333 I
BRADI1G38110 Brachypodium distachyon BRADI1G38110 I
BRADI2G06180 Brachypodium distachyon BRADI2G06180 I
BRADI3G08790 Brachypodium distachyon BRADI3G08790 I
BRADI3G33355 Brachypodium distachyon BRADI3G33355 I
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I
BRADI5G17620 Brachypodium distachyon BRADI5G17620 I
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I
Cagra.21659s0001 Capsella grandiflora Cagra.21659s0001 I
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I
Carubv10006567m.g Capsella rubella Carubv10006567m.g I
Carubv10017799m.g Capsella rubella Carubv10017799m.g I
Carubv10023699m.g Capsella rubella Carubv10023699m.g I
Carubv10024051m.g Capsella rubella Carubv10024051m.g I
cassava17387.m1 Manihot esculenta cassava17387.m1 I
cassava19875.m1 Manihot esculenta cassava19875.m1 I
cassava19912.m1 Manihot esculenta cassava19912.m1 I
cassava33300.m1 Manihot esculenta cassava33300.m1 I
cassava4979.m1 Manihot esculenta cassava4979.m1 I
Ca_05941 Cicer arietinum Ca_05941 I
Ca_12765 Cicer arietinum Ca_12765 I
chr1.CM0206.1000.nd Lotus japonicus chr1.CM0206.1000.nd I
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I
Cla004187 Citrullus lanatus Cla004187 I
Cla017050 Citrullus lanatus Cla017050 I
Cla023465 Citrullus lanatus Cla023465 I
Cucsa.116550 Cucumis sativus Cucsa.116550 I
Cucsa.121080 Cucumis sativus Cucsa.121080 I
Cucsa.235510 Cucumis sativus Cucsa.235510 I
Cucsa.312570 Cucumis sativus Cucsa.312570 I
ERF034 Arabidopsis thaliana AT2G44940 D
ERF035 Arabidopsis thaliana AT3G60490 D
ERF042 Arabidopsis thaliana AT2G25820 I
ERF043 Arabidopsis thaliana AT4G32800 D
Eucgr.C03785 Eucalyptus grandis Eucgr.C03785 I
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I
F775_11989 Aegilops tauschii F775_11989 I
F775_14820 Aegilops tauschii F775_14820 I
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I
GLYMA01G13410 Glycine max GLYMA01G13410 I
GLYMA05G04920 Glycine max GLYMA05G04920 I
GLYMA05G35741 Glycine max GLYMA05G35741 I
GLYMA08G03910 Glycine max GLYMA08G03910 I
GLYMA17G15310 Glycine max GLYMA17G15310 I
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I
Gorai.001G049800 Gossypium raimondii Gorai.001G049800 I
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I
GRMZM2G005301 Zea mays GRMZM2G005301 I
GRMZM2G028969 Zea mays GRMZM2G028969 I
GRMZM2G041839 Zea mays GRMZM2G041839 I
GRMZM2G047918 Zea mays GRMZM2G047918 I
GRMZM2G048621 Zea mays GRMZM2G048621 I
GRMZM2G072926 Zea mays GRMZM2G072926 I
GRMZM2G073047 Zea mays GRMZM2G073047 I
GRMZM2G172936 Zea mays GRMZM2G172936 I
GRMZM5G806839 Zea mays GRMZM5G806839 I
GRMZM5G816314 Zea mays GRMZM5G816314 I
GRMZM5G842961 Zea mays GRMZM5G842961 I
GRMZM5G889719 Zea mays GRMZM5G889719 I
GSMUA_Achr10G14070_001 Musa acuminata GSMUA_Achr10G14070_001 I
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I
GSMUA_Achr2G09430_001 Musa acuminata GSMUA_Achr2G09430_001 I
GSMUA_Achr6G26280_001 Musa acuminata GSMUA_Achr6G26280_001 I
GSMUA_Achr9G05860_001 Musa acuminata GSMUA_Achr9G05860_001 I
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I
gw1.14.214.1 Physcomitrella patens gw1.14.214.1 I
LjSGA_095655.1 Lotus japonicus LjSGA_095655.1 I
LjT37H17.40.nd Lotus japonicus LjT37H17.40.nd I
LPERR02G21590 Leersia perrieri LPERR02G21590 I
LPERR04G16900 Leersia perrieri LPERR04G16900 I
LPERR06G15020 Leersia perrieri LPERR06G15020 I
LPERR10G14320 Leersia perrieri LPERR10G14320 I
Lus10001601.g Linum usitatissimum Lus10001601.g I
Lus10002801.g Linum usitatissimum Lus10002801.g I
Lus10038607.g Linum usitatissimum Lus10038607.g I
mgf019024m Mimulus guttatus mgf019024m I
mgf022802m Mimulus guttatus mgf022802m I
mgf022971m Mimulus guttatus mgf022971m I
MLOC_17203 Hordeum vulgare MLOC_17203 I
MLOC_3095 Hordeum vulgare MLOC_3095 I
MLOC_75601 Hordeum vulgare MLOC_75601 I
MTR_4g100650 Medicago truncatula MTR_4g100650 I
MTR_5g012910 Medicago truncatula MTR_5g012910 I
MTR_7g046260 Medicago truncatula MTR_7g046260 I
MTR_8g102800 Medicago truncatula MTR_8g102800 I
OB01G16440 Oryza brachyantha OB01G16440 I
OB04G27840 Oryza brachyantha OB04G27840 I
OB06G25840 Oryza brachyantha OB06G25840 I
OBART01G06440 Oryza barthii OBART01G06440 I
OBART04G20820 Oryza barthii OBART04G20820 I
OGLUM01G07430 Oryza glumaepatula OGLUM01G07430 I
OGLUM02G09810 Oryza glumaepatula OGLUM02G09810 I
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I
OGLUM10G18570 Oryza glumaepatula OGLUM10G18570 I
OMERI01G06530 Oryza meridionalis OMERI01G06530 I
OMERI02G10950 Oryza meridionalis OMERI02G10950 I
OMERI02G25900 Oryza meridionalis OMERI02G25900 I
OMERI02G25910 Oryza meridionalis OMERI02G25910 I
OMERI04G17260 Oryza meridionalis OMERI04G17260 I
OMERI04G17270 Oryza meridionalis OMERI04G17270 I
OMERI04G17290 Oryza meridionalis OMERI04G17290 I
OMERI06G18780 Oryza meridionalis OMERI06G18780 I
OMERI08G00520 Oryza meridionalis OMERI08G00520 I
ONIVA01G08000 Oryza nivara ONIVA01G08000 I
ONIVA02G10590 Oryza nivara ONIVA02G10590 I
ONIVA02G28960 Oryza nivara ONIVA02G28960 I
ONIVA02G28990 Oryza nivara ONIVA02G28990 I
ONIVA04G19040 Oryza nivara ONIVA04G19040 I
ONIVA04G19060 Oryza nivara ONIVA04G19060 I
ONIVA04G19090 Oryza nivara ONIVA04G19090 I
ONIVA06G21640 Oryza nivara ONIVA06G21640 I
ONIVA10G21000 Oryza nivara ONIVA10G21000 I
OPUNC01G06210 Oryza punctata OPUNC01G06210 I
OPUNC02G08670 Oryza punctata OPUNC02G08670 I
OPUNC02G24210 Oryza punctata OPUNC02G24210 I
OPUNC02G24230 Oryza punctata OPUNC02G24230 I
OPUNC04G18500 Oryza punctata OPUNC04G18500 I
OPUNC04G18520 Oryza punctata OPUNC04G18520 I
OPUNC04G18530 Oryza punctata OPUNC04G18530 I
OPUNC06G16400 Oryza punctata OPUNC06G16400 I
OPUNC10G16830 Oryza punctata OPUNC10G16830 I
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I
ORGLA01G0061000 Oryza glaberrima ORGLA01G0061000 I
ORGLA02G0087100 Oryza glaberrima ORGLA02G0087100 I
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I
ORGLA10G0136200 Oryza glaberrima ORGLA10G0136200 I
ORUFI01G06970 Oryza rufipogon ORUFI01G06970 I
ORUFI02G09750 Oryza rufipogon ORUFI02G09750 I
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I
ORUFI06G19350 Oryza rufipogon ORUFI06G19350 I
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I
OS01G0200600 Oryza sativa OS01G0200600 I
OS02G0656600 Oryza sativa OS02G0656600 I
OS02G0657000 Oryza sativa OS02G0657000 I
OS04G0549700 Oryza sativa OS04G0549700 I
OS04G0549800 Oryza sativa OS04G0549800 I
OS04G0550200 Oryza sativa OS04G0550200 I
Pavir.Aa00833 Panicum virgatum Pavir.Aa00833 I
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I
Pavir.Ab00844 Panicum virgatum Pavir.Ab00844 I
Pavir.Ab02603 Panicum virgatum Pavir.Ab02603 I
Pavir.Da00839 Panicum virgatum Pavir.Da00839 I
Pavir.Eb00249 Panicum virgatum Pavir.Eb00249 I
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I
Pavir.Ga01094 Panicum virgatum Pavir.Ga01094 I
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I
Pavir.Ia02208 Panicum virgatum Pavir.Ia02208 I
Pavir.J17742 Panicum virgatum Pavir.J17742 I
PGSC0003DMG400000365 Solanum tuberosum PGSC0003DMG400000365 I
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I
PK25970.1 Cannabis sativa PK25970.1 I
Pm017610 Prunus mume Pm017610 I
Pm023417 Prunus mume Pm023417 I
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I
Q8LKX0_MAIZE Zea mays Q8LKX0_MAIZE D
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I
Sb01g029065 Sorghum bicolor Sb01g029065 I
Sb03g002630 Sorghum bicolor Sb03g002630 I
Sb04g032940 Sorghum bicolor Sb04g032940 I
Sb04g032960 Sorghum bicolor Sb04g032960 I
Sb06g024530 Sorghum bicolor Sb06g024530 I
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I
Si002749m.g Setaria italica Si002749m.g I
Si007144m.g Setaria italica Si007144m.g I
Si010703m.g Setaria italica Si010703m.g I
Si012254m.g Setaria italica Si012254m.g I
Si017865m.g Setaria italica Si017865m.g I
Si017995m.g Setaria italica Si017995m.g I
Si018188m.g Setaria italica Si018188m.g I
Si018222m.g Setaria italica Si018222m.g I
Si019772m.g Setaria italica Si019772m.g I
Si039427m.g Setaria italica Si039427m.g I
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I
Solyc12g008350.1 Solanum lycopersicum Solyc12g008350.1 I
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I
TCM_005639 Theobroma cacao TCM_005639 I
TCM_014892 Theobroma cacao TCM_014892 I
TCM_015930 Theobroma cacao TCM_015930 I
TCM_028851 Theobroma cacao TCM_028851 I
TCM_044478 Theobroma cacao TCM_044478 I
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I
TRAES3BF073700060CFD_g Triticum aestivum TRAES3BF073700060CFD_g I
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I
Traes_7DL_538583735 Triticum aestivum Traes_7DL_538583735 I
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I