CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_21291
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_21291
T330058_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA17892
Sox
45
109
KTSNAFLIYRTIYSRMLTQKGFPSKMTEVSRWASDSWNDESEELKNEFREFAKKVSQIYQKNAEL
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.227127
Amphimedon queenslandica
Aqu1.227127
N
0.437
GLOINDRAFT_11295
Rhizophagus irregularis
GLOINDRAFT_11295
N
0.431
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.443
GLOINDRAFT_14705
Rhizophagus irregularis
GLOINDRAFT_14705
N
0.418
GLOINDRAFT_18435
Rhizophagus irregularis
GLOINDRAFT_18435
N
0.425
GLOINDRAFT_209293
Rhizophagus irregularis
GLOINDRAFT_209293
N
0.479
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.513
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.456
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.570
GLOINDRAFT_27214
Rhizophagus irregularis
GLOINDRAFT_27214
N
0.469
GLOINDRAFT_31701
Rhizophagus irregularis
GLOINDRAFT_31701
N
0.466
GLOINDRAFT_329858
Rhizophagus irregularis
GLOINDRAFT_329858
N
0.436
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.434
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.432
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.473
GLOINDRAFT_344841
Rhizophagus irregularis
GLOINDRAFT_344841
N
0.474
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.423
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.496
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.472
GLOINDRAFT_35702
Rhizophagus irregularis
GLOINDRAFT_35702
N
0.422
GLOINDRAFT_35923
Rhizophagus irregularis
GLOINDRAFT_35923
N
0.473
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.507
GLOINDRAFT_7438
Rhizophagus irregularis
GLOINDRAFT_7438
N
0.416
GLOINDRAFT_8155
Rhizophagus irregularis
GLOINDRAFT_8155
N
0.416