CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JAAARDRAFT_93592
(
Jaapia argillacea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
JAAARDRAFT_93592
T330722_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.425
0.456
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.425
0.456
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ57658
Sox
1
71
PRPPNAWILYRSDKLKSLPPVPAGAPRRAQADVSREISLMWKNETEIVRSEYERRAELKKAQHQQLYPNYR
Links
Other
Sox
family TFs
Other
Jaapia argillacea
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_192530
Agaricus bisporus
AGABI2DRAFT_192530
N
0.547
AUEXF2481DRAFT_37338
Aureobasidium subglaciale
AUEXF2481DRAFT_37338
I
0.434
BGHDH14_bgh03211
Blumeria graminis
BGHDH14_bgh03211
I
0.458
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
0.433
BN946_scf184994.g55
Trametes cinnabarina
BN946_scf184994.g55
I
0.464
BN946_scf184994.g60
Trametes cinnabarina
BN946_scf184994.g60
N
0.524
BOTBODRAFT_99971
Botryobasidium botryosum
BOTBODRAFT_99971
N
0.557
CC1G_07392
Coprinopsis cinerea
CC1G_07392
N
0.582
CERSUDRAFT_118953
Ceriporiopsis subvermispora
CERSUDRAFT_118953
N
0.418
CERSUDRAFT_123639
Ceriporiopsis subvermispora
CERSUDRAFT_123639
N
0.527
CERSUDRAFT_61596
Ceriporiopsis subvermispora
CERSUDRAFT_61596
N
0.416
CH063_09403
Colletotrichum higginsianum
CH063_09403
I
0.425
CSUB01_02050
Colletotrichum sublineola
CSUB01_02050
I
0.416
CY34DRAFT_56447
Suillus luteus
CY34DRAFT_56447
N
0.568
CY34DRAFT_811615
Suillus luteus
CY34DRAFT_811615
N
0.427
DICSQDRAFT_67430
Dichomitus squalens
DICSQDRAFT_67430
I
0.476
E5Q_02264
Mixia osmundae
E5Q_02264
N
0.498
F503_06490
Ophiostoma piceae uamh
F503_06490
I
0.429
FIBRA_02642
Fibroporia radiculosa
FIBRA_02642
I
0.565
FOMPIDRAFT_1081834
Fomitopsis pinicola
FOMPIDRAFT_1081834
I
0.485
FOMPIDRAFT_1124101
Fomitopsis pinicola
FOMPIDRAFT_1124101
N
0.477
FOMPIDRAFT_140591
Fomitopsis pinicola
FOMPIDRAFT_140591
I
0.507
GALMADRAFT_133211
Galerina marginata
GALMADRAFT_133211
I
0.442
GALMADRAFT_227034
Galerina marginata
GALMADRAFT_227034
N
0.581
Genemark.3077_g
Heterobasidion annosum
Genemark.3077_g
N
0.579
GLOINDRAFT_26890
Rhizophagus irregularis
GLOINDRAFT_26890
N
0.424
GLOINDRAFT_44046
Rhizophagus irregularis
GLOINDRAFT_44046
I
0.424
GLOINDRAFT_50485
Rhizophagus irregularis
GLOINDRAFT_50485
I
0.421
GLOTRDRAFT_38143
Gloeophyllum trabeum
GLOTRDRAFT_38143
I
0.634
GLRG_04643
Colletotrichum graminicola
GLRG_04643
I
0.416
GYMLUDRAFT_43821
Gymnopus luxurians
GYMLUDRAFT_43821
N
0.415
GYMLUDRAFT_71519
Gymnopus luxurians
GYMLUDRAFT_71519
I
0.430
HETIRDRAFT_476671
Heterobasidion irregulare
HETIRDRAFT_476671
N
0.579
J056_002105
Wallemia ichthyophaga
J056_002105
N
0.478
JAAARDRAFT_113690
Jaapia argillacea
JAAARDRAFT_113690
I
0.420
K443DRAFT_1017
Laccaria amethystina
K443DRAFT_1017
N
0.544
LACBIDRAFT_386478
Laccaria bicolor
LACBIDRAFT_386478
N
0.540
M378DRAFT_176509
Amanita muscaria
M378DRAFT_176509
I
0.614
M404DRAFT_551810
Pisolithus tinctorius
M404DRAFT_551810
N
0.598
M408DRAFT_20648
Serendipita vermifera
M408DRAFT_20648
N
0.575
M413DRAFT_47178
Hebeloma cylindrosporum
M413DRAFT_47178
N
0.476
M422DRAFT_111122
Sphaerobolus stellatus
M422DRAFT_111122
I
0.500
M422DRAFT_114792
Sphaerobolus stellatus
M422DRAFT_114792
N
0.457
M422DRAFT_121750
Sphaerobolus stellatus
M422DRAFT_121750
N
0.465
M422DRAFT_126587
Sphaerobolus stellatus
M422DRAFT_126587
N
0.465
M422DRAFT_146751
Sphaerobolus stellatus
M422DRAFT_146751
N
0.458
M422DRAFT_195883
Sphaerobolus stellatus
M422DRAFT_195883
N
0.508
M422DRAFT_91926
Sphaerobolus stellatus
M422DRAFT_91926
I
0.500
M437DRAFT_74676
Aureobasidium melanogenum
M437DRAFT_74676
I
0.434
M438DRAFT_346080
Aureobasidium pullulans
M438DRAFT_346080
I
0.434
MANI_028883
Metarhizium anisopliae
MANI_028883
I
0.420
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
0.425
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
0.425
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
0.425
MELLADRAFT_94219
Melampsora laricipopulina
MELLADRAFT_94219
N
0.445
Moror_11417
Moniliophthora roreri
Moror_11417
N
0.450
Moror_9029
Moniliophthora roreri
Moror_9029
N
0.527
MVLG_00343
Microbotryum violaceum
MVLG_00343
N
0.494
MVLG_04343
Microbotryum violaceum
MVLG_04343
N
0.471
MVLG_04557
Microbotryum violaceum
MVLG_04557
N
0.439
PaG_02426
Pseudozyma aphidis
PaG_02426
N
0.423
PaG_05617
Pseudozyma aphidis
PaG_05617
N
0.487
PAN0_018c5621
Pseudozyma antarctica
PAN0_018c5621
N
0.487
PAXINDRAFT_137714
Paxillus involutus
PAXINDRAFT_137714
I
0.429
PAXRUDRAFT_55546
Paxillus rubicundulus
PAXRUDRAFT_55546
N
0.604
PGTG_16202
Puccinia graminis
PGTG_16202
I
0.484
PHLGIDRAFT_121875
Phlebiopsis gigantea
PHLGIDRAFT_121875
N
0.427
PHSY_001785
Pseudozyma hubeiensis
PHSY_001785
N
0.476
PIIN_01319
Piriformospora indica
PIIN_01319
N
0.549
PILCRDRAFT_57544
Piloderma croceum
PILCRDRAFT_57544
N
0.497
PISMIDRAFT_80640
Pisolithus microcarpus
PISMIDRAFT_80640
N
0.552
POSPLDRAFT_104707
Postia placenta
POSPLDRAFT_104707
I
0.520
POSPLDRAFT_43059
Postia placenta
POSPLDRAFT_43059
I
0.520
PSEUBRA_SCAF20g03099
Pseudozyma brasiliensis
PSEUBRA_SCAF20g03099
N
0.476
RHTO_05563
Rhodosporidium toruloides
RHTO_05563
N
0.467
RHTO_08065
Rhodosporidium toruloides
RHTO_08065
N
0.418
RTG_00382
Rhodotorula glutinis
RTG_00382
N
0.467
RTG_02343
Rhodotorula glutinis
RTG_02343
N
0.431
SBOR_9074
Sclerotinia borealis
SBOR_9074
I
0.448
SCHCODRAFT_107892
Schizophyllum commune
SCHCODRAFT_107892
N
0.415
SCHCODRAFT_255090
Schizophyllum commune
SCHCODRAFT_255090
N
0.419
SCHCODRAFT_255799
Schizophyllum commune
SCHCODRAFT_255799
N
0.428
SCLCIDRAFT_11527
Scleroderma citrinum
SCLCIDRAFT_11527
N
0.528
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.444
SERLA73DRAFT_18452
Serpula lacrymans
SERLA73DRAFT_18452
I
0.569
SJAG_05153
Schizosaccharomyces japonicus
SJAG_05153
I
0.420
sr16650
Sporisorium reilianum
sr16650
N
0.476
SS1G_04006
Sclerotinia sclerotiorum
SS1G_04006
I
0.448
UHOR_02166
Ustilago hordei
UHOR_02166
I
0.425
UHOR_08562
Ustilago hordei
UHOR_08562
N
0.476
UM06025
Ustilago maydis
UM06025
N
0.470