CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KAFR_0B06030
(
Kazachstania africana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
KAFR_0B06030
T330761_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.676
0.913
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF56899
Sox
98
171
PKKPLTVFFAYSAYVRQELRDARQKAGLPPLSSTEITQEISKKWKELSDNEKEKWKQAYNVELTHYQKAKQDYL
Links
Other
Sox
family TFs
Other
Kazachstania africana
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_03452
Beauveria bassiana
BBA_03452
I
CCM_02166
Cordyceps militaris
CCM_02166
I
estExt_Genewise1Plus.C_110569
Neurospora discreta
estExt_Genewise1Plus.C_110569
I
F503_00471
Ophiostoma piceae uamh
F503_00471
I
FFUJ_01862
Fusarium fujikuroi
FFUJ_01862
I
FGRRES_01638
Fusarium graminearum
FGRRES_01638
I
FOXG_11065
Fusarium oxysporum
FOXG_11065
I
FPSE_09752
Fusarium pseudograminearum
FPSE_09752
I
FVEG_09736
Fusarium verticillioides
FVEG_09736
I
GGTG_04497
Gaeumannomyces graminis
GGTG_04497
I
MAPG_08463
Magnaporthe poae
MAPG_08463
I
MYCTH_2312830
Myceliophthora thermophila
MYCTH_2312830
I
NCU05411
Neurospora crassa
NCU05411
D
NEUTE1DRAFT_102079
Neurospora tetrasperma
NEUTE1DRAFT_102079
I
SMAC_04150
Sordaria macrospora
SMAC_04150
I
THITE_2124588
Thielavia terrestris
THITE_2124588
I