CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-pir_contig_154-snap-gene-0.23
(
Pythium irregulare
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
maker-pir_contig_154-snap-gene-0.23
T331146_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000016418
Sox
352
417
MPRPLNPFIMYCQVQKDAINKLKPRRSASETRKIMGDMWRKMMDEEKEYYSQLAEVENEKRRREHI
Links
Other
Sox
family TFs
Other
Pythium irregulare
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015874
Ailuropoda melanoleuca
ENSAMEG00000015874
I
ENSBTAG00000004151
Bos taurus
ENSBTAG00000004151
N
ENSBTAG00000045616
Bos taurus
ENSBTAG00000045616
I
ENSBTAG00000047279
Bos taurus
ENSBTAG00000047279
N
ENSCAFG00000016520
Canis familiaris
ENSCAFG00000016520
I
ENSCAFG00000016523
Canis familiaris
ENSCAFG00000016523
I
ENSDNOG00000040947
Dasypus novemcinctus
ENSDNOG00000040947
I
ENSMPUG00000018977
Mustela putorius furo
ENSMPUG00000018977
I
ENSOARG00000004633
Ovis aries
ENSOARG00000004633
I
ENSOARG00000005439
Ovis aries
ENSOARG00000005439
N
ENSOARG00000005470
Ovis aries
ENSOARG00000005470
N
ENSOARG00000005509
Ovis aries
ENSOARG00000005509
N
ENSSTOG00000022212
Ictidomys tridecemlineatus
ENSSTOG00000022212
I
ENSSTOG00000026413
Ictidomys tridecemlineatus
ENSSTOG00000026413
I
ENSSTOG00000027979
Ictidomys tridecemlineatus
ENSSTOG00000027979
I
YBX3
Tursiops truncatus
ENSTTRG00000008045
I