maker-pir_contig_154-snap-gene-0.23 (Pythium irregulare)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-pir_contig_154-snap-gene-0.23 T331146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000016418 Sox 352 417

Links

Other Sox family TFs
Other Pythium irregulare TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-piw_contig_1640-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_1640-fgenesh-gene-0.2 N 0.718
maker-pag1_scaffold_76-snap-gene-0.53 Pythium aphanidermatum maker-pag1_scaffold_76-snap-gene-0.53 N 0.647
PYU1_G008731 Pythium ultimum PYU1_G008731 N 0.647
maker-par_contig_405-snap-gene-0.7 Pythium arrhenomanes maker-par_contig_405-snap-gene-0.7 N 0.635
maker-pve_contig_11-snap-gene-0.53 Pythium vexans maker-pve_contig_11-snap-gene-0.53 N 0.605
F443_10130 Phytophthora parasitica F443_10130 N 0.594
PITG_01288 Phytophthora infestans PITG_01288 N 0.594
HpaG812527 Hyaloperonospora arabidopsidis HpaG812527 N 0.422
estExt_fgenesh1_kg.C_340020 Phytophthora capsici estExt_fgenesh1_kg.C_340020 N 0.421