CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OB02G19930
(
Oryza brachyantha
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
OB02G19930
T331547_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB02G19930.1
Sox
160
225
RKKPCPAYALWCKDQWNEIKRTNPEADFKEVSNALGTKWKALGAEEKQPYEERYRVEKEAYLQVVG
OB02G19930.1
Sox
283
349
PKHPMSAYFVYSQERRAALIAEKKNVPEIGRITGEEWKGMTEAEKAPYEEAARKQKEEYQKQMEAYR
OB02G19930.1
Sox
413
481
PKKPASSFLLFSREARRQLAEERPGVASSTLNALVAVKWKEMGEAERQAWNGRAAEVMAAYKSEMEEYT
Links
Other
Sox
family TFs
Other
Oryza brachyantha
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10008720m.g
Citrus clementina
Ciclev10008720m.g
N
0.000
GLYMA12G35650
Glycine max
GLYMA12G35650
N
0.000
SapurV1A.0083s0430
Salix purpurea
SapurV1A.0083s0430
N
0.000