OB02G19930 (Oryza brachyantha)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OB02G19930 T331547_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G19930.1 Sox 160 225
OB02G19930.1 Sox 283 349
OB02G19930.1 Sox 413 481

Links

Other Sox family TFs
Other Oryza brachyantha TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI02G11890 Oryza meridionalis OMERI02G11890 N 0.654
LPERR02G09420 Leersia perrieri LPERR02G09420 N 0.653
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.639
BGIOSGA006746 Oryza indica BGIOSGA006746 I 0.628
OBART02G11160 Oryza barthii OBART02G11160 I 0.628
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I 0.628
ONIVA02G12490 Oryza nivara ONIVA02G12490 I 0.628
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I 0.628
OPUNC02G09900 Oryza punctata OPUNC02G09900 I 0.623
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.618
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.618
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.617
OLONG_021730 Oryza longistaminata OLONG_021730 N 0.615
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.606
Si017040m.g Setaria italica Si017040m.g I 0.593
MLOC_57360 Hordeum vulgare MLOC_57360 N 0.536
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.530
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.518
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.476
F775_10696 Aegilops tauschii F775_10696 N 0.468
mgf015439m Mimulus guttatus mgf015439m I 0.468
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.452
GLYMA08G02550 Glycine max GLYMA08G02550 N 0.450
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.449
Cla011101 Citrullus lanatus Cla011101 I 0.445
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.443
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.437
TCM_016416 Theobroma cacao TCM_016416 I 0.430
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.429
Pm024077 Prunus mume Pm024077 I 0.429
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.429
30190.m010807 Ricinus communis 30190.m010807 I 0.428
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.427
AMTR_s00093p00057150 Amborella trichopoda AMTR_s00093p00057150 N 0.418