MLOC_57360 (Hordeum vulgare)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 MLOC_57360 T331313_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_57360.1 Sox 213 277
MLOC_57360.1 Sox 334 400
MLOC_57360.1 Sox 459 527
MLOC_57360.2 Sox 154 218
MLOC_57360.2 Sox 275 341
MLOC_57360.2 Sox 400 468
MLOC_57360.3 Sox 62 114
MLOC_57360.3 Sox 171 237
MLOC_57360.3 Sox 296 364

Links

Other Sox family TFs
Other Hordeum vulgare TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.609
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.600
Si017040m.g Setaria italica Si017040m.g I 0.592
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.589
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.580
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.570
BGIOSGA006746 Oryza indica BGIOSGA006746 I 0.559
OBART02G11160 Oryza barthii OBART02G11160 I 0.559
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I 0.559
ONIVA02G12490 Oryza nivara ONIVA02G12490 I 0.559
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I 0.559
OPUNC02G09900 Oryza punctata OPUNC02G09900 I 0.555
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.553
OMERI02G11890 Oryza meridionalis OMERI02G11890 N 0.552
OLONG_021730 Oryza longistaminata OLONG_021730 N 0.547
OB02G19930 Oryza brachyantha OB02G19930 N 0.536
LPERR02G09420 Leersia perrieri LPERR02G09420 N 0.533
mgf015439m Mimulus guttatus mgf015439m I 0.516
F775_10696 Aegilops tauschii F775_10696 N 0.501
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.450
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.446
TCM_016416 Theobroma cacao TCM_016416 I 0.428
PDK_20s1767201g001 Phoenix dactylifera PDK_20s1767201g001 N 0.424
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.423
Pm024077 Prunus mume Pm024077 I 0.423
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.419
Cla011101 Citrullus lanatus Cla011101 I 0.418
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.418
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.416
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.416