CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_10696
(
Aegilops tauschii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
F775_10696
T329488_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT05540
Sox
211
275
RKKPAPAYILWCKDQWAEIKKSPDADFKEVSNALGAKWKTLSNEEKQPYEERYRQEKEAYLQVVG
EMT05540
Sox
333
399
PKQPMSAYFLYSQERRAALAAEKKSVPEIGKITGEEWKGMTEAQKAPYEEAARKQKEGYQKQMEVYK
EMT05540
Sox
459
487
PKRPASSFLLFSKEARKQLAEERPGVNKR
Links
Other
Sox
family TFs
Other
Aegilops tauschii
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2AL_72F4E1905
Triticum aestivum
Traes_2AL_72F4E1905
I
0.552
Sb04g009610
Sorghum bicolor
Sb04g009610
I
0.519
Pavir.Ab01026
Panicum virgatum
Pavir.Ab01026
I
0.507
GRMZM2G060253
Zea mays
GRMZM2G060253
I
0.504
BRADI3G09690
Brachypodium distachyon
BRADI3G09690
I
0.502
MLOC_57360
Hordeum vulgare
MLOC_57360
N
0.501
Pavir.J07596
Panicum virgatum
Pavir.J07596
I
0.498
OB02G19930
Oryza brachyantha
OB02G19930
N
0.468
BGIOSGA006746
Oryza indica
BGIOSGA006746
I
0.464
OBART02G11160
Oryza barthii
OBART02G11160
I
0.464
OGLUM02G11100
Oryza glumaepatula
OGLUM02G11100
I
0.464
OLONG_021730
Oryza longistaminata
OLONG_021730
N
0.464
OMERI02G11890
Oryza meridionalis
OMERI02G11890
N
0.464
ONIVA02G12490
Oryza nivara
ONIVA02G12490
I
0.464
ORUFI02G11130
Oryza rufipogon
ORUFI02G11130
I
0.464
OPUNC02G09900
Oryza punctata
OPUNC02G09900
I
0.459
LPERR02G09420
Leersia perrieri
LPERR02G09420
N
0.458
Si017040m.g
Setaria italica
Si017040m.g
I
0.450
Traes_2BL_0F18ED637
Triticum aestivum
Traes_2BL_0F18ED637
N
0.436
Gorai.007G025500
Gossypium raimondii
Gorai.007G025500
I
0.436
Aquca_013_00142
Aquilegia coerulea
Aquca_013_00142
I
0.419