CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF2g02551
(
Pseudozyma brasiliensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PSEUBRA_SCAF2g02551
T332213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST07439
Sox
20
65
KLDHQRRLSKVIGELWRNEAADVKATFYEKAHQAAREHAERYPEYR
Links
Other
Sox
family TFs
Other
Pseudozyma brasiliensis
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG020665.1
Alligator sinensis
Alligator_sinensis_CCG020665.1
I
Cmyd_10007606
Chelonia mydas
Cmyd_10007606
I
ENSAMEG00000001160
Ailuropoda melanoleuca
ENSAMEG00000001160
I
ENSAPLG00000013908
Anas platyrhynchos
ENSAPLG00000013908
I
ENSBTAP00000000107-D1
Bos grunniens
ENSBTAP00000000107-D1
I
ENSCSAG00000018034
Chlorocebus sabaeus
ENSCSAG00000018034
I
ENSGALG00000029138
Gallus gallus
ENSGALG00000029138
I
ENSGMOG00000005993
Gadus morhua
ENSGMOG00000005993
I
ENSLACG00000011159
Latimeria chalumnae
ENSLACG00000011159
I
ENSMEUG00000000555
Macropus eugenii
ENSMEUG00000000555
I
ENSMEUG00000006544
Macropus eugenii
ENSMEUG00000006544
I
ENSMPUG00000004298
Mustela putorius furo
ENSMPUG00000004298
I
ENSNLEG00000009996
Nomascus leucogenys
ENSNLEG00000009996
I
ENSOANG00000028880
Ornithorhynchus anatinus
ENSOANG00000028880
I
ENSOARG00000020880
Ovis aries
ENSOARG00000020880
I
ENSONIG00000006454
Oreochromis niloticus
ENSONIG00000006454
I
ENSP00000357965
Macaca fascicularis
ENSP00000357965
I
ENSPANG00000020214
Papio anubis
ENSPANG00000020214
I
ENSPFOG00000004429
Poecilia formosa
ENSPFOG00000004429
I
ENSPFOG00000004623
Poecilia formosa
ENSPFOG00000004623
I
ENSPPYG00000000887
Pongo abelii
ENSPPYG00000000887
I
ENSPSIG00000008407
Pelodiscus sinensis
ENSPSIG00000008407
I
ENSSHAG00000012701
Sarcophilus harrisii
ENSSHAG00000012701
I
ENSSTOG00000006770
Ictidomys tridecemlineatus
ENSSTOG00000006770
I
ENSXMAG00000016600
Xiphophorus maculatus
ENSXMAG00000016600
I
Myotis_brandtii_SETDB1_10031834
Myotis brandtii
Myotis_brandtii_SETDB1_10031834
I
Pvit_04977
Pogona vitticeps
Pvit_04977
I
SETDB1
Tursiops truncatus
ENSTTRG00000006966
I
SETDB1
Taeniopygia guttata
ENSTGUG00000004684
I
SETDB1
Tupaia belangeri
ENSTBEG00000009306
I
SETDB1
Gallus gallus
ENSGALG00000024051
I
SETDB1
Sus scrofa
ENSSSCG00000006645
I
SETDB1
Vicugna pacos
ENSVPAG00000005440
I
Setdb1
Rattus norvegicus
ENSRNOG00000021143
I
SETDB1
Pteropus vampyrus
ENSPVAG00000004355
I
SETDB1
Pan troglodytes
ENSPTRG00000001267
I
SETDB1
Choloepus hoffmanni
ENSCHOG00000004013
I
SETDB1
Canis familiaris
ENSCAFG00000023501
I
SETDB1
Bos taurus
ENSBTAG00000000098
I
SETDB1
Procavia capensis
ENSPCAG00000002527
I
SETDB1
Myotis lucifugus
ENSMLUG00000010486
I
SETDB1
Gorilla gorilla
ENSGGOG00000016308
I
SETDB1
Felis catus
ENSFCAG00000009655
I
SETDB1
Erinaceus europaeus
ENSEEUG00000015825
I
SETDB1
Loxodonta africana
ENSLAFG00000004006
I
SETDB1
Equus caballus
ENSECAG00000023954
I
Setdb1
Dipodomys ordii
ENSDORG00000006830
I
SETDB1
Meleagris gallopavo
ENSMGAG00000001018
I
SETDB1
Homo sapiens
ENSG00000143379
D
SETDB1
Microcebus murinus
ENSMICG00000000425
I
SETDB1
Macaca mulatta
ENSMMUG00000023235
I
SETDB1
Monodelphis domestica
ENSMODG00000018821
I
SETDB1
Dasypus novemcinctus
ENSDNOG00000007754
I
Setdb1
Mus musculus
ENSMUSG00000015697
I
SETDB1
Cavia porcellus
ENSCPOG00000001632
I
SETDB1
Callithrix jacchus
ENSCJAG00000006972
I
SETDB1
Oryctolagus cuniculus
ENSOCUG00000003642
I
SETDB1
Otolemur garnettii
ENSOGAG00000010320
I
SETDB1
Ochotona princeps
ENSOPRG00000015349
I
setdb1.L
Xenopus laevis
XB-GENE-866480
I
setdb1b
Tetraodon nigroviridis
ENSTNIG00000008065
I
setdb1b
Gasterosteus aculeatus
ENSGACG00000011675
I
setdb1b
Takifugu rubripes
ENSTRUG00000014641
I
setdb1b
Oryzias latipes
ENSORLG00000010602
I
setdb1b
Danio rerio
ENSDARG00000099021
I
XP_002935515
Xenopus tropicalis
XP_002935515
I
XP_002935516
Xenopus tropicalis
XP_002935516
I