CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_000980
(
Schistosoma mansoni
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Smp_000980
T332644_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_000980.1:pep
Sox
10
80
PKGPMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLAVLDRERFNREMCDYV
Smp_000980.1:pep
Sox
100
166
PARAWSAFFFFCDEFRSKVRESNPDWKVADIAKELGRQWETCQDKAKYELLAQKDKQRYEEDMIKYR
Links
Other
Sox
family TFs
Other
Schistosoma mansoni
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022472
Oryza indica
BGIOSGA022472
N
OBART06G06220
Oryza barthii
OBART06G06220
N
OBART06G06230
Oryza barthii
OBART06G06230
N
OGLUM06G06540
Oryza glumaepatula
OGLUM06G06540
N
OGLUM06G06550
Oryza glumaepatula
OGLUM06G06550
N
OGLUM06G08330
Oryza glumaepatula
OGLUM06G08330
N
OMERI03G32220
Oryza meridionalis
OMERI03G32220
N
OMERI06G09430
Oryza meridionalis
OMERI06G09430
N
ONIVA06G07220
Oryza nivara
ONIVA06G07220
N
ONIVA06G09060
Oryza nivara
ONIVA06G09060
N
OPUNC06G07550
Oryza punctata
OPUNC06G07550
N
ORGLA06G0057300
Oryza glaberrima
ORGLA06G0057300
N
ORGLA06G0057400
Oryza glaberrima
ORGLA06G0057400
N
ORUFI06G06500
Oryza rufipogon
ORUFI06G06500
N
ORUFI06G08090
Oryza rufipogon
ORUFI06G08090
N