CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI03G32220
(
Oryza meridionalis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OMERI03G32220
T003430_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G32220.1
AP2
142
193
RKYRGVRLRQWGKWVAEIRLPNSRRRIWLGSYDSPEKAARAFDAAFICLRGG
Links
Other
AP2
family TFs
Other
Oryza meridionalis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART06G06220
Oryza barthii
OBART06G06220
N
0.811
ORGLA06G0057300
Oryza glaberrima
ORGLA06G0057300
N
0.811
ONIVA06G07220
Oryza nivara
ONIVA06G07220
N
0.805
OGLUM06G06540
Oryza glumaepatula
OGLUM06G06540
N
0.795
OGLUM06G06550
Oryza glumaepatula
OGLUM06G06550
N
0.787
OBART06G06230
Oryza barthii
OBART06G06230
N
0.785
ORGLA06G0057400
Oryza glaberrima
ORGLA06G0057400
N
0.785
OPUNC06G07550
Oryza punctata
OPUNC06G07550
N
0.773
OGLUM06G08330
Oryza glumaepatula
OGLUM06G08330
N
0.771
OMERI06G09430
Oryza meridionalis
OMERI06G09430
N
0.771
BGIOSGA022472
Oryza indica
BGIOSGA022472
N
0.763
ORUFI06G06500
Oryza rufipogon
ORUFI06G06500
N
0.763
BGIOSGA022479
Oryza indica
BGIOSGA022479
N
0.745
ONIVA06G09060
Oryza nivara
ONIVA06G09060
N
0.743
ORUFI06G08090
Oryza rufipogon
ORUFI06G08090
N
0.743
Si008104m.g
Setaria italica
Si008104m.g
I
0.688
OBART06G07840
Oryza barthii
OBART06G07840
N
0.683
MTR_3g105480
Medicago truncatula
MTR_3g105480
I
0.681
MTR_3g105510
Medicago truncatula
MTR_3g105510
I
0.681
PGSC0003DMG400030781
Solanum tuberosum
PGSC0003DMG400030781
I
0.679
Solyc06g054630.1
Solanum lycopersicum
Solyc06g054630.1
I
0.679
GSMUA_Achr9G14360_001
Musa acuminata
GSMUA_Achr9G14360_001
I
0.678