TC009854 (Tribolium castaneum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TC009854 T332809_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox15
M03973_2.00 		Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW		 SELEX
Nitta et al.(2015)
Sox15_1 		0.448 0.706
Sox15
M03974_2.00 		Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox15_2 		0.448 0.706
Sox15
M06450_2.00 		Drosophila melanogaster
RWACAATR
YATTGTWY		 B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613 		0.448 0.706
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC009854-PA Sox 136 186

Links

Other Sox family TFs
Other Tribolium castaneum TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000792 Aedes aegypti AAEL000792 I 0.635
AALB009865 Anopheles albimanus AALB009865 I 0.537
AALB009868 Anopheles albimanus AALB009868 I 0.556
AARA000827 Anopheles arabiensis AARA000827 I 0.635
AARA005391 Anopheles arabiensis AARA005391 I 0.556
AARA005393 Anopheles arabiensis AARA005393 I 0.537
AARA011914 Anopheles arabiensis AARA011914 I 0.490
AATE006542 Anopheles atroparvus AATE006542 N 0.464
AATE012157 Anopheles atroparvus AATE012157 N 0.635
ACAC_0000143401 Angiostrongylus cantonensis ACAC_0000143401 N 0.509
ACEP10855 Atta cephalotes ACEP10855 I 0.561
ACEP10859 Atta cephalotes ACEP10859 I 0.548
ACEP25270 Atta cephalotes ACEP25270 N 0.462
ACEP25857 Atta cephalotes ACEP25857 I 0.635
ACHR009359 Anopheles christyi ACHR009359 I 0.635
ACOM022800 Anopheles coluzzii ACOM022800 I 0.556
ACOM022803 Anopheles coluzzii ACOM022803 I 0.425
ACOM026664 Anopheles coluzzii ACOM026664 N 0.635
ACOM034662 Anopheles coluzzii ACOM034662 I 0.490
ACUA008554 Anopheles culicifacies ACUA008554 I 0.556
ACUA011783 Anopheles culicifacies ACUA011783 N 0.635
ACUA026266 Anopheles culicifacies ACUA026266 I 0.490
ACUA026638 Anopheles culicifacies ACUA026638 I 0.537
ACYPI006194 Acyrthosiphon pisum ACYPI006194 I 0.477
ADIR005630 Anopheles dirus ADIR005630 I 0.556
ADIR005633 Anopheles dirus ADIR005633 I 0.537
ADIR009659 Anopheles dirus ADIR009659 I 0.635
AEPI003628 Anopheles epiroticus AEPI003628 I 0.556
AEPI007651 Anopheles epiroticus AEPI007651 N 0.421
AEPI007946 Anopheles epiroticus AEPI007946 N 0.635
AEPI010515 Anopheles epiroticus AEPI010515 I 0.537
AFAF017335 Anopheles farauti AFAF017335 I 0.635
AFUN009319 Anopheles funestus AFUN009319 I 0.635
AFUN010196 Anopheles funestus AFUN010196 I 0.537
AFUN010199 Anopheles funestus AFUN010199 I 0.556
AGAP010923 Anopheles gambiae AGAP010923 I 0.425
AGAP012033 Anopheles gambiae AGAP012033 I 0.635
AMAM006332 Anopheles maculatus AMAM006332 I 0.563
AMAM015893 Anopheles maculatus AMAM015893 I 0.468
AMAM018985 Anopheles maculatus AMAM018985 I 0.635
AMAM022760 Anopheles maculatus AMAM022760 N 0.421
AMEC008804 Anopheles melas AMEC008804 I 0.537
AMEC012053 Anopheles melas AMEC012053 I 0.556
AMEC014560 Anopheles melas AMEC014560 I 0.635
AMEC016085 Anopheles melas AMEC016085 I 0.490
AMEM010579 Anopheles merus AMEM010579 I 0.425
AMEM014190 Anopheles merus AMEM014190 I 0.556
AMIN001219 Anopheles minimus AMIN001219 I 0.490
AMIN008219 Anopheles minimus AMIN008219 I 0.635
AMIN009301 Anopheles minimus AMIN009301 I 0.556
AMIN009304 Anopheles minimus AMIN009304 I 0.537
ANCCAN_22368 Ancylostoma caninum ANCCAN_22368 N 0.515
ANCDUO_17471 Ancylostoma duodenale ANCDUO_17471 I 0.416
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N 0.509
AQUA001259 Anopheles quadriannulatus AQUA001259 I 0.425
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.556
AQUA004309 Anopheles quadriannulatus AQUA004309 I 0.490
ASIS016076 Anopheles sinensis ASIS016076 N 0.635
ASTEI06129 Anopheles stephensi ASTEI06129 N 0.635
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.556
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.556
BGIBMGA004367 Bombyx mori BGIBMGA004367 I 0.635
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.635
BGLB010904 Biomphalaria glabrata BGLB010904 I 0.564
CapteG70604 Capitella teleta CapteG70604 I 0.417
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.635
CGI_10003991 Crassostrea gigas CGI_10003991 I 0.417
CLEC006959 Cimex lectularius CLEC006959 I 0.541
CLEC006961 Cimex lectularius CLEC006961 I 0.556
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.556
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.635
CPIJ014016 Culex quinquefasciatus CPIJ014016 N 0.464
CPIJ014424 Culex quinquefasciatus CPIJ014424 I 0.503
CPIJ017659 Culex quinquefasciatus CPIJ017659 I 0.510
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.556
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.635
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N 0.464
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I 0.503
CpipJ_CPIJ017659 Culex pipiens CpipJ_CPIJ017659 I 0.510
D918_08316 Trichuris suis D918_08316 N 0.469
DAPPUDRAFT_35405 Daphnia pulex DAPPUDRAFT_35405 I 0.476
ENSAMEG00000016773 Ailuropoda melanoleuca ENSAMEG00000016773 I 0.424
ENSAMXG00000007582 Astyanax mexicanus ENSAMXG00000007582 I 0.479
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.459
ENSCSAVG00000000494 Ciona savignyi ENSCSAVG00000000494 I 0.431
ENSDNOG00000034433 Dasypus novemcinctus ENSDNOG00000034433 N 0.437
ENSDORG00000001450 Dipodomys ordii ENSDORG00000001450 I 0.418
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I 0.563
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I 0.563
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I 0.563
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.499
ENSMEUG00000014457 Macropus eugenii ENSMEUG00000014457 I 0.418
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I 0.524
ENSNLEG00000009528 Nomascus leucogenys ENSNLEG00000009528 I 0.492
ENSOARG00000009998 Ovis aries ENSOARG00000009998 I 0.541
ENSPMAG00000009255 Petromyzon marinus ENSPMAG00000009255 I 0.438
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I 0.563
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I 0.602
ENSPTRG00000005969 Pan troglodytes ENSPTRG00000005969 I 0.561
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.499
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.499
ENSTTRG00000005878 Tursiops truncatus ENSTTRG00000005878 I 0.602
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I 0.563
GA21052 Drosophila pseudoobscura FBgn0081040 I 0.448
GB40960 Apis mellifera GB40960 I 0.635
GE12330 Drosophila yakuba FBgn0230081 I 0.448
genemark-nMf.1.1.scaf16788-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf16788-processed-gene-0.1 I 0.489
GF12898 Drosophila ananassae FBgn0089932 I 0.448
Gfo_R009506 Geospiza fortis Gfo_R009506 I 0.601
GG22439 Drosophila erecta FBgn0114611 I 0.448
GH20045 Drosophila grimshawi FBgn0127509 I 0.448
GI20453 Drosophila mojavensis FBgn0143189 I 0.448
GJ22304 Drosophila virilis FBgn0209417 I 0.448
GK21748 Drosophila willistoni FBgn0223733 I 0.448
GL17288 Drosophila persimilis FBgn0154891 I 0.448
GM20225 Drosophila sechellia FBgn0175108 I 0.448
HelroG148277 Helobdella robusta HelroG148277 N 0.478
HMEL016850 Heliconius melpomene HMEL016850 I 0.635
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.635
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.563
ISCW009925 Ixodes scapularis ISCW009925 I 0.563
KGM_05609 Danaus plexippus KGM_05609 N 0.635
L798_02392 Zootermopsis nevadensis L798_02392 I 0.635
L798_04020 Zootermopsis nevadensis L798_04020 N 0.420
L798_09360 Zootermopsis nevadensis L798_09360 N 0.431
L798_12045 Zootermopsis nevadensis L798_12045 I 0.514
L898_g3197 Steinernema monticolum L898_g3197 I 0.509
LCUP001585 Lucilia cuprina LCUP001585 I 0.556
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.635
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.556
LotgiG120517 Lottia gigantea LotgiG120517 I 0.444
LotgiG88815 Lottia gigantea LotgiG88815 I 0.564
MCINX002905 Melitaea cinxia MCINX002905 I 0.556
MCINX011114 Melitaea cinxia MCINX011114 I 0.477
MDOA011444 Musca domestica MDOA011444 I 0.448
MESCA000459 Megaselia scalaris MESCA000459 I 0.556
MESCA009852 Megaselia scalaris MESCA009852 I 0.537
ML23337a Mnemiopsis leidyi ML23337a N 0.494
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.509
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.509
nDi.2.2.2.g10379 Dirofilaria immitis nDi.2.2.2.g10379 I 0.518
NEMVEDRAFT_v1g163545 Nematostella vectensis NEMVEDRAFT_v1g163545 I 0.428
nLs.2.1.2.g10155 Litomosoides sigmodontis nLs.2.1.2.g10155 I 0.511
NV15963 Nasonia vitripennis NV15963 I 0.477
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.606
PEQ_0000771101 Parascaris equorum PEQ_0000771101 I 0.447
PHUM433270 Pediculus humanus PHUM433270 N 0.635
PPAI008595 Phlebotomus papatasi PPAI008595 N 0.566
PPAI009257 Phlebotomus papatasi PPAI009257 N 0.485
RPRC012125 Rhodnius prolixus RPRC012125 N 0.635
RPRC012780 Rhodnius prolixus RPRC012780 I 0.563
RPRC014334 Rhodnius prolixus RPRC014334 I 0.541
SINV16626 Solenopsis invicta SINV16626 I 0.635
SINV19744 Solenopsis invicta SINV19744 I 0.548
SINV19753 Solenopsis invicta SINV19753 I 0.561
SMAR010127 Strigamia maritima SMAR010127 N 0.635
SOX1 Anolis carolinensis ENSACAG00000006346 I 0.567
SOX10 Erinaceus europaeus ENSEEUG00000011263 I 0.563
SOX10 Meleagris gallopavo ENSMGAG00000012508 I 0.601
SOX10 Ochotona princeps ENSOPRG00000013575 I 0.563
SOX10 Procavia capensis ENSPCAG00000005913 I 0.563
SOX12 Sus scrofa ENSSSCG00000021920 I 0.509
SOX13 Felis catus ENSFCAG00000002900 I 0.499
SOX13 Microcebus murinus ENSMICG00000009236 I 0.499
Sox15 Drosophila melanogaster FBgn0005613 D 0.448
SOX17 Procavia capensis ENSPCAG00000003188 I 0.602
SOX3 Pteropus vampyrus ENSPVAG00000003166 I 0.541
SOX5 Sorex araneus ENSSARG00000007963 I 0.499
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.499
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.499
SOX6 Echinops telfairi ENSETEG00000001898 I 0.499
SOX6 Procavia capensis ENSPCAG00000001398 N 0.499
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.499
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.563
SOX9 Pteropus vampyrus ENSPVAG00000010505 I 0.563
sox9b Danio rerio ENSDARG00000043923 I 0.563
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.416
TC003791 Tribolium castaneum TC003791 I 0.563
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.499
tetur03g05800 Tetranychus urticae tetur03g05800 I 0.448
WUBG_09252 Wuchereria bancrofti WUBG_09252 I 0.511
XP_002935939 Xenopus tropicalis XP_002935939 I 0.563
YQE_08560 Dendroctonus ponderosae YQE_08560 I 0.483
YQE_13042 Dendroctonus ponderosae YQE_13042 I 0.635