SOX12 (Sus scrofa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSSCG00000021920 T329146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox12
M00205_2.00 		Mus musculus
HWTTGTBNNN
NNNVACAAWD		 PBM
Badis et al.(2009)
Sox12_3957 		0.439 0.895
SOX12
M05789_2.00 		Homo sapiens
NATTGTTCGGK
MCCGAACAATN		 SELEX
Yin et al.(2017)
SOX12_eDBD_HT-SELEX 		0.439 0.895
SOX12
M05790_2.00 		Homo sapiens
YATTGTTCBKT
AMVGAACAATR		 SELEX
Yin et al.(2017)
SOX12_eDBD_Methyl-HT-SELEX 		0.439 0.895
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000024477 Sox 40 77

Links

Other Sox family TFs
Other Sus scrofa TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_25812 Ancylostoma duodenale ANCDUO_25812 N 0.644
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.644
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.644
AQUA001262 Anopheles quadriannulatus AQUA001262 I 0.640
MCINX002905 Melitaea cinxia MCINX002905 I 0.640
CpipJ_CPIJ012042 Culex pipiens CpipJ_CPIJ012042 I 0.640
CPIJ012042 Culex quinquefasciatus CPIJ012042 I 0.640
SOX13 Felis catus ENSFCAG00000002900 I 0.634
ACOM022800 Anopheles coluzzii ACOM022800 I 0.634
ADIR005630 Anopheles dirus ADIR005630 I 0.634
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.634
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.634
AMAM006332 Anopheles maculatus AMAM006332 I 0.634
AEPI003628 Anopheles epiroticus AEPI003628 I 0.634
SOX13 Microcebus murinus ENSMICG00000009236 I 0.634
SOX6 Echinops telfairi ENSETEG00000001898 I 0.634
SOX6 Procavia capensis ENSPCAG00000001398 N 0.634
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.634
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.634
MESCA000459 Megaselia scalaris MESCA000459 I 0.634
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.634
SOX5 Sorex araneus ENSSARG00000007963 I 0.634
AALB009868 Anopheles albimanus AALB009868 I 0.634
AMEC012053 Anopheles melas AMEC012053 I 0.634
LCUP001585 Lucilia cuprina LCUP001585 I 0.634
AARA005391 Anopheles arabiensis AARA005391 I 0.634
ACUA008554 Anopheles culicifacies ACUA008554 I 0.634
ACEP10855 Atta cephalotes ACEP10855 I 0.634
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.634
AMIN009301 Anopheles minimus AMIN009301 I 0.634
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.634
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.634
AMEM014190 Anopheles merus AMEM014190 I 0.634
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.634
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.634
SOX9 Dasypus novemcinctus ENSDNOG00000033826 I 0.618
CPIJ012500 Culex quinquefasciatus CPIJ012500 N 0.615
ENSNLEG00000009528 Nomascus leucogenys ENSNLEG00000009528 I 0.615
Cflo_01077--XP_001122045.1_APIME Camponotus floridanus Cflo_01077--XP_001122045.1_APIME N 0.615
PHUM433270 Pediculus humanus PHUM433270 N 0.615
CpipJ_CPIJ012500 Culex pipiens CpipJ_CPIJ012500 N 0.615
KGM_05609 Danaus plexippus KGM_05609 N 0.615
ACOM026664 Anopheles coluzzii ACOM026664 N 0.615
Hsal_04214--XP_001122045.1_APIME Harpegnathos saltator Hsal_04214--XP_001122045.1_APIME N 0.615
ASIS016076 Anopheles sinensis ASIS016076 N 0.615
SOX17 Procavia capensis ENSPCAG00000003188 I 0.613
SINV16626 Solenopsis invicta SINV16626 I 0.608
ACEP25857 Atta cephalotes ACEP25857 I 0.608
ADIR009659 Anopheles dirus ADIR009659 I 0.608
AGAP012033 Anopheles gambiae AGAP012033 I 0.608
YQE_13042 Dendroctonus ponderosae YQE_13042 I 0.608
GB40960 Apis mellifera GB40960 I 0.608
Ocbimv22020621m.g Octopus bimaculoides Ocbimv22020621m.g N 0.608
SMAR010127 Strigamia maritima SMAR010127 N 0.608
BGLB002734 Biomphalaria glabrata BGLB002734 I 0.608
LDEC007549 Leptinotarsa decemlineata LDEC007549 N 0.608
AFUN009319 Anopheles funestus AFUN009319 I 0.608
AMEC014560 Anopheles melas AMEC014560 I 0.608
ACUA011783 Anopheles culicifacies ACUA011783 N 0.608
AARA000827 Anopheles arabiensis AARA000827 I 0.608
RPRC012125 Rhodnius prolixus RPRC012125 N 0.608
HMEL016850 Heliconius melpomene HMEL016850 I 0.608
AAEL000792 Aedes aegypti AAEL000792 I 0.608
D918_08316 Trichuris suis D918_08316 N 0.604
CPIJ014424 Culex quinquefasciatus CPIJ014424 I 0.589
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I 0.589
ACAC_0000143401 Angiostrongylus cantonensis ACAC_0000143401 N 0.588
AFUN010199 Anopheles funestus AFUN010199 I 0.587
SINV19753 Solenopsis invicta SINV19753 I 0.587
CLEC006961 Cimex lectularius CLEC006961 I 0.585
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I 0.572
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I 0.572
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I 0.572
SOX10 Ochotona princeps ENSOPRG00000013575 I 0.572
SOX10 Erinaceus europaeus ENSEEUG00000011263 I 0.572
SOX10 Procavia capensis ENSPCAG00000005913 I 0.572
SOX9 Pteropus vampyrus ENSPVAG00000010505 I 0.572
LotgiG88815 Lottia gigantea LotgiG88815 I 0.570
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I 0.570
ISCW009925 Ixodes scapularis ISCW009925 I 0.570
BGLB010904 Biomphalaria glabrata BGLB010904 I 0.570
AATE012157 Anopheles atroparvus AATE012157 N 0.569
ENSTTRG00000005878 Tursiops truncatus ENSTTRG00000005878 I 0.567
AEPI007946 Anopheles epiroticus AEPI007946 N 0.566
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I 0.564
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.563
TC003791 Tribolium castaneum TC003791 I 0.563
XP_002935939 Xenopus tropicalis XP_002935939 I 0.563
RPRC012780 Rhodnius prolixus RPRC012780 I 0.563
sox9b Danio rerio ENSDARG00000043923 I 0.563
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I 0.563
BGIBMGA004367 Bombyx mori BGIBMGA004367 I 0.562
AMIN008219 Anopheles minimus AMIN008219 I 0.562
ASTEI06129 Anopheles stephensi ASTEI06129 N 0.559
AMAM018985 Anopheles maculatus AMAM018985 I 0.559
ACHR009359 Anopheles christyi ACHR009359 I 0.559
L798_02392 Zootermopsis nevadensis L798_02392 I 0.553
AQUA004309 Anopheles quadriannulatus AQUA004309 I 0.544
AATE006542 Anopheles atroparvus AATE006542 N 0.544
ACUA026266 Anopheles culicifacies ACUA026266 I 0.544
CPIJ014016 Culex quinquefasciatus CPIJ014016 N 0.544
AMEC016085 Anopheles melas AMEC016085 I 0.544
L898_g3197 Steinernema monticolum L898_g3197 I 0.544
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N 0.544
ANCCAN_22368 Ancylostoma caninum ANCCAN_22368 N 0.544
PPAI008595 Phlebotomus papatasi PPAI008595 N 0.540
AARA011914 Anopheles arabiensis AARA011914 I 0.538
ACOM034662 Anopheles coluzzii ACOM034662 I 0.538
AMIN001219 Anopheles minimus AMIN001219 I 0.538
ENSCPOG00000024750 Cavia porcellus ENSCPOG00000024750 I 0.533
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I 0.529
Gfo_R009506 Geospiza fortis Gfo_R009506 I 0.525
SOX10 Meleagris gallopavo ENSMGAG00000012508 I 0.525
SOX1 Anolis carolinensis ENSACAG00000006346 I 0.523
ENSPTRG00000005969 Pan troglodytes ENSPTRG00000005969 I 0.517
nDi.2.2.2.g10379 Dirofilaria immitis nDi.2.2.2.g10379 I 0.515
ENSAMXG00000007582 Astyanax mexicanus ENSAMXG00000007582 I 0.514
nLs.2.1.2.g10155 Litomosoides sigmodontis nLs.2.1.2.g10155 I 0.509
AFAF017335 Anopheles farauti AFAF017335 I 0.509
TC009854 Tribolium castaneum TC009854 I 0.509
WUBG_09252 Wuchereria bancrofti WUBG_09252 I 0.509
L798_04020 Zootermopsis nevadensis L798_04020 N 0.507
L798_09360 Zootermopsis nevadensis L798_09360 N 0.507
AEPI010515 Anopheles epiroticus AEPI010515 I 0.504
ACEP10859 Atta cephalotes ACEP10859 I 0.504
AMEC008804 Anopheles melas AMEC008804 I 0.504
AMIN009304 Anopheles minimus AMIN009304 I 0.504
AFUN010196 Anopheles funestus AFUN010196 I 0.504
AARA005393 Anopheles arabiensis AARA005393 I 0.504
ADIR005633 Anopheles dirus ADIR005633 I 0.504
ACUA026638 Anopheles culicifacies ACUA026638 I 0.504
AALB009865 Anopheles albimanus AALB009865 I 0.504
CLEC006959 Cimex lectularius CLEC006959 I 0.504
MESCA009852 Megaselia scalaris MESCA009852 I 0.504
RPRC014334 Rhodnius prolixus RPRC014334 I 0.504
SINV19744 Solenopsis invicta SINV19744 I 0.504
ENSOARG00000009998 Ovis aries ENSOARG00000009998 I 0.503
SOX3 Pteropus vampyrus ENSPVAG00000003166 I 0.503
GLOINDRAFT_28614 Rhizophagus irregularis GLOINDRAFT_28614 N 0.499
PPAI009257 Phlebotomus papatasi PPAI009257 N 0.498
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.491
ML23337a Mnemiopsis leidyi ML23337a N 0.485
SOX11 Ornithorhynchus anatinus ENSOANG00000006361 N 0.480
AMAM022760 Anopheles maculatus AMAM022760 N 0.476
AEPI007651 Anopheles epiroticus AEPI007651 N 0.476
L798_12045 Zootermopsis nevadensis L798_12045 I 0.476
CpipJ_CPIJ017659 Culex pipiens CpipJ_CPIJ017659 I 0.476
CPIJ017659 Culex quinquefasciatus CPIJ017659 I 0.476
SEPMUDRAFT_152382 Sphaerulina musiva SEPMUDRAFT_152382 N 0.466
ACEP25270 Atta cephalotes ACEP25270 N 0.457
PXEA_0001829801 Protopolystoma xenopodis PXEA_0001829801 N 0.454
ANCDUO_17471 Ancylostoma duodenale ANCDUO_17471 I 0.451
CGOC_0001130501 Cylicostephanus goldi CGOC_0001130501 I 0.449
HelroG148277 Helobdella robusta HelroG148277 N 0.449
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0 N 0.449
PEQ_0000771101 Parascaris equorum PEQ_0000771101 I 0.448
DAPPUDRAFT_346928 Daphnia pulex DAPPUDRAFT_346928 N 0.448
ENSAMEG00000014001 Ailuropoda melanoleuca ENSAMEG00000014001 I 0.446
ENSCSAVG00000009278 Ciona savignyi ENSCSAVG00000009278 I 0.445
genemark-nMf.1.1.scaf16788-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf16788-processed-gene-0.1 I 0.443
SOX4 Canis familiaris ENSCAFG00000024883 I 0.442
SOX4 Choloepus hoffmanni ENSCHOG00000002300 I 0.442
ENSP00000244745 Macaca fascicularis ENSP00000244745 I 0.442
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.441
ENSSHAG00000004381 Sarcophilus harrisii ENSSHAG00000004381 I 0.439
SOX12 Tursiops truncatus ENSTTRG00000008502 I 0.439
Sox12 Rattus norvegicus ENSRNOG00000007514 I 0.439
SOX12 Pan troglodytes ENSPTRG00000030670 I 0.439
ENSCSAG00000018762 Chlorocebus sabaeus ENSCSAG00000018762 I 0.439
SOX12 Pteropus vampyrus ENSPVAG00000000181 I 0.439
ENSDNOG00000032024 Dasypus novemcinctus ENSDNOG00000032024 I 0.439
ENSPSIG00000001278 Pelodiscus sinensis ENSPSIG00000001278 I 0.439
ENSFALG00000014163 Ficedula albicollis ENSFALG00000014163 I 0.439
ENSPPYG00000010870 Pongo abelii ENSPPYG00000010870 I 0.439
ENSPANG00000001811 Papio anubis ENSPANG00000001811 I 0.439
SOX12 Homo sapiens ENSG00000177732 D 0.439
YQE_08560 Dendroctonus ponderosae YQE_08560 I 0.439
SOX12 Canis familiaris ENSCAFG00000006973 I 0.439
SOX12 Monodelphis domestica ENSMODG00000019507 I 0.439
Sox12 Mus musculus ENSMUSG00000051817 D 0.439
ENSCPOG00000010342 Cavia porcellus ENSCPOG00000010342 I 0.439
Alligator_sinensis_CCG000354.1 Alligator sinensis Alligator_sinensis_CCG000354.1 I 0.439
SOX12 Otolemur garnettii ENSOGAG00000024255 I 0.439
HBP1 Homo sapiens ENSG00000105856 D 0.437
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.436
AMAM015893 Anopheles maculatus AMAM015893 I 0.435
Hba_12930 Heterorhabditis bacteriophora Hba_12930 I 0.435
estExt_fgenesh1_pg.C_90036 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_90036 N 0.427
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.426
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.426
Sjc_0095610 Schistosoma japonicum Sjc_0095610 N 0.424
THITE_2010224 Thielavia terrestris THITE_2010224 N 0.421
SS1G_05340 Sclerotinia sclerotiorum SS1G_05340 N 0.421
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.420
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N 0.417