CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCLIV_060790
(
Neospora caninum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
NCLIV_060790
T333448_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_060790
Sox
25
95
PKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKLTYQKKAEQEKIRYQREMSLYN
Links
Other
Sox
family TFs
Other
Neospora caninum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29822.m003476
Ricinus communis
29822.m003476
I
0.424
AACERI_AaceriADL310W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL310W
I
0.420
AGOS_ADL310W
Ashbya gossypii
AGOS_ADL310W
I
0.420
Aquca_007_00897
Aquilegia coerulea
Aquca_007_00897
I
0.444
Bostr.7867s1415
Boechera stricta
Bostr.7867s1415
I
0.433
BOTBODRAFT_30512
Botryobasidium botryosum
BOTBODRAFT_30512
N
0.454
cassava42041.valid.m1
Manihot esculenta
cassava42041.valid.m1
I
0.424
Ecym_7459
Eremothecium cymbalariae
Ecym_7459
I
0.420
HMGB5
Arabidopsis lyrata
Al_scaffold_0007_498
I
0.433
MPH_02795
Macrophomina phaseolina
MPH_02795
I
0.438
NCLIV_043670
Neospora caninum
NCLIV_043670
I
0.427
NDAI_0A05290
Naumovozyma dairenensis
NDAI_0A05290
I
0.416
PFL0145c
Plasmodium falciparum
PFL0145c
I
0.416
PV09_01265
Verruconis gallopava
PV09_01265
I
0.451
SEPMUDRAFT_150255
Sphaerulina musiva
SEPMUDRAFT_150255
I
0.436
TBLA_0I02240
Tetrapisispora blattae
TBLA_0I02240
I
0.420
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
0.427
TGME49_019830
Toxoplasma gondii
TGME49_019830
N
0.741
UCRNP2_2405
Neofusicoccum parvum
UCRNP2_2405
I
0.438