Gfo_R010508 (Geospiza fortis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Gfo_R010508 T333744_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R010508 Sox 1 30
Gfo_R010508 Sox 46 114

Links

Other Sox family TFs
Other Geospiza fortis TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_066630 Albugo laibachii ALNC14_066630 N 0.000
ALNC14_090760 Albugo laibachii ALNC14_090760 N 0.000
ALNC14_110220 Albugo laibachii ALNC14_110220 N 0.000
ALNC14_122900 Albugo laibachii ALNC14_122900 N 0.000
estExt_fgenesh1_kg.C_10721 Phytophthora capsici estExt_fgenesh1_kg.C_10721 N 0.000
estExt_fgenesh1_kg.C_21048 Phytophthora capsici estExt_fgenesh1_kg.C_21048 N 0.000
estExt_fgenesh1_kg.C_21051 Phytophthora capsici estExt_fgenesh1_kg.C_21051 N 0.000
estExt_fgenesh1_pg.C_230105 Phytophthora capsici estExt_fgenesh1_pg.C_230105 N 0.000
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N 0.000
F443_03190 Phytophthora parasitica F443_03190 N 0.000
F443_06409 Phytophthora parasitica F443_06409 N 0.000
F443_15766 Phytophthora parasitica F443_15766 N 0.000
F443_15811 Phytophthora parasitica F443_15811 N 0.000
F443_18702 Phytophthora parasitica F443_18702 N 0.000
F443_18703 Phytophthora parasitica F443_18703 N 0.000
fgenesh-pir_contig_580-abinit-gene-0.31 Pythium irregulare fgenesh-pir_contig_580-abinit-gene-0.31 N 0.000
fgenesh_scip_prom.28083.10919 Phytophthora lateralis fgenesh_scip_prom.28083.10919 N 0.000
fgenesh_scip_prom.28083.12007 Phytophthora lateralis fgenesh_scip_prom.28083.12007 N 0.000
fgenesh_scip_prom.28083.4437 Phytophthora lateralis fgenesh_scip_prom.28083.4437 N 0.000
fgenesh_scip_prom.28083.4438 Phytophthora lateralis fgenesh_scip_prom.28083.4438 N 0.000
fgenesh_scip_prom.28083.520 Phytophthora lateralis fgenesh_scip_prom.28083.520 N 0.000
fgenesh_scip_prom.46568.1669 Phytophthora kernoviae fgenesh_scip_prom.46568.1669 N 0.000
fgenesh_scip_prom.46568.3588 Phytophthora kernoviae fgenesh_scip_prom.46568.3588 N 0.000
fgenesh_scip_prom.46568.7094 Phytophthora kernoviae fgenesh_scip_prom.46568.7094 N 0.000
fgenesh_scip_prom.46568.8092 Phytophthora kernoviae fgenesh_scip_prom.46568.8092 N 0.000
fgenesh_scip_prom.46568.8093 Phytophthora kernoviae fgenesh_scip_prom.46568.8093 N 0.000
HpaG802951 Hyaloperonospora arabidopsidis HpaG802951 N 0.000
HpaG808860 Hyaloperonospora arabidopsidis HpaG808860 N 0.000
HpaG810973 Hyaloperonospora arabidopsidis HpaG810973 N 0.000
maker-pag1_scaffold_1127-snap-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_1127-snap-gene-0.1 I 0.000
maker-pag1_scaffold_183-snap-gene-0.28 Pythium aphanidermatum maker-pag1_scaffold_183-snap-gene-0.28 N 0.000
maker-pag1_scaffold_287-snap-gene-0.16 Pythium aphanidermatum maker-pag1_scaffold_287-snap-gene-0.16 N 0.000
maker-pag1_scaffold_440-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_440-fgenesh-gene-0.4 N 0.000
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N 0.000
maker-pag1_scaffold_785-snap-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_785-snap-gene-0.4 N 0.000
maker-par_contig_1213-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_1213-fgenesh-gene-0.0 N 0.000
maker-par_contig_1213-fgenesh-gene-0.2 Pythium arrhenomanes maker-par_contig_1213-fgenesh-gene-0.2 N 0.000
maker-par_contig_654-snap-gene-0.10 Pythium arrhenomanes maker-par_contig_654-snap-gene-0.10 N 0.000
maker-pir_contig_320-snap-gene-0.13 Pythium irregulare maker-pir_contig_320-snap-gene-0.13 N 0.000
maker-pir_contig_551-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_551-fgenesh-gene-0.4 N 0.000
maker-pir_contig_636-snap-gene-0.12 Pythium irregulare maker-pir_contig_636-snap-gene-0.12 N 0.000
maker-pir_contig_698-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_698-fgenesh-gene-0.1 N 0.000
maker-pir_contig_85-snap-gene-0.26 Pythium irregulare maker-pir_contig_85-snap-gene-0.26 N 0.000
maker-piw_contig_207-snap-gene-0.13 Pythium iwayamai maker-piw_contig_207-snap-gene-0.13 N 0.000
maker-piw_contig_3132-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_3132-fgenesh-gene-0.1 N 0.000
maker-pve_contig_635-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_635-fgenesh-gene-0.0 N 0.000
maker-pve_contig_642-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_642-fgenesh-gene-0.1 N 0.000
maker-pve_contig_835-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_835-fgenesh-gene-0.1 N 0.000
Phyra73275 Phytophthora ramorum Phyra73275 N 0.000
Phyra76200 Phytophthora ramorum Phyra76200 N 0.000
Phyra80975 Phytophthora ramorum Phyra80975 N 0.000
Phyra84925 Phytophthora ramorum Phyra84925 N 0.000
Phyra95869 Phytophthora ramorum Phyra95869 N 0.000
Physo129725 Phytophthora sojae Physo129725 N 0.000
Physo129726 Phytophthora sojae Physo129726 N 0.000
Physo131272 Phytophthora sojae Physo131272 N 0.000
Physo134017 Phytophthora sojae Physo134017 N 0.000
Physo134018 Phytophthora sojae Physo134018 N 0.000
Physo142192 Phytophthora sojae Physo142192 N 0.000
Physo144764 Phytophthora sojae Physo144764 N 0.000
PITG_05353 Phytophthora infestans PITG_05353 N 0.000
PITG_11760 Phytophthora infestans PITG_11760 N 0.000
PITG_14513 Phytophthora infestans PITG_14513 N 0.000
PITG_14514 Phytophthora infestans PITG_14514 N 0.000
PITG_20646 Phytophthora infestans PITG_20646 N 0.000
PITG_20647 Phytophthora infestans PITG_20647 N 0.000
PITG_22459 Phytophthora infestans PITG_22459 N 0.000
PYU1_G003405 Pythium ultimum PYU1_G003405 N 0.000
PYU1_G007450 Pythium ultimum PYU1_G007450 N 0.000
PYU1_G009787 Pythium ultimum PYU1_G009787 N 0.000
PYU1_G013874 Pythium ultimum PYU1_G013874 N 0.000
PYU1_G013875 Pythium ultimum PYU1_G013875 N 0.000
SPRG_00586 Saprolegnia parasitica SPRG_00586 N 0.000
SPRG_01018 Saprolegnia parasitica SPRG_01018 N 0.000
SPRG_03693 Saprolegnia parasitica SPRG_03693 N 0.000
SPRG_06796 Saprolegnia parasitica SPRG_06796 N 0.000
SPRG_09686 Saprolegnia parasitica SPRG_09686 N 0.000