cassava45417.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava45417.m1 T333944_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava45417.m1 Sox 44 112
cassava45417.m1 Sox 160 225

Links

Other Sox family TFs
Other Manihot esculenta TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001734 Aedes aegypti AAEL001734 I
AALB004290 Anopheles albimanus AALB004290 I
AARA007509 Anopheles arabiensis AARA007509 I
AATE010112 Anopheles atroparvus AATE010112 I
ACEP18226 Atta cephalotes ACEP18226 I
ACHR009808 Anopheles christyi ACHR009808 I
ACOM024837 Anopheles coluzzii ACOM024837 I
ACUA007612 Anopheles culicifacies ACUA007612 I
ACYPI56663 Acyrthosiphon pisum ACYPI56663 I
ADIR008104 Anopheles dirus ADIR008104 I
AEPI002211 Anopheles epiroticus AEPI002211 I
AFAF003449 Anopheles farauti AFAF003449 I
AFUN010689 Anopheles funestus AFUN010689 I
AGAP006018 Anopheles gambiae AGAP006018 I
AMAM005405 Anopheles maculatus AMAM005405 I
AMEC009148 Anopheles melas AMEC009148 I
AMEM002094 Anopheles merus AMEM002094 I
AMIN010926 Anopheles minimus AMIN010926 I
AQUA005657 Anopheles quadriannulatus AQUA005657 I
ASTEI06308 Anopheles stephensi ASTEI06308 I
bab Drosophila virilis FBgn0064311 I
bab1 Drosophila melanogaster FBgn0004870 D
bab2 Drosophila melanogaster FBgn0025525 I
BGIBMGA012232 Bombyx mori BGIBMGA012232 I
Cflo_05255--XP_001121063.1_APIME Camponotus floridanus Cflo_05255--XP_001121063.1_APIME I
CLEC000425 Cimex lectularius CLEC000425 I
CPIJ011217 Culex quinquefasciatus CPIJ011217 I
CpipJ_CPIJ011217 Culex pipiens CpipJ_CPIJ011217 I
DAPPUDRAFT_299763 Daphnia pulex DAPPUDRAFT_299763 I
GA23169 Drosophila pseudoobscura FBgn0244571 I
GA28271 Drosophila pseudoobscura FBgn0249634 I
GB40871 Apis mellifera GB40871 I
GD13495 Drosophila simulans FBgn0185206 I
GD13499 Drosophila simulans FBgn0185210 I
GE20983 Drosophila yakuba FBgn0238267 I
GE20986 Drosophila yakuba FBgn0238269 I
GF10078 Drosophila ananassae FBgn0087119 I
GG14622 Drosophila erecta FBgn0106878 I
GG14628 Drosophila erecta FBgn0106884 I
GH15670 Drosophila grimshawi FBgn0123141 I
GI12710 Drosophila mojavensis FBgn0135467 I
GI12712 Drosophila mojavensis FBgn0135469 I
GJ12696 Drosophila virilis FBgn0199933 I
GK16858 Drosophila willistoni FBgn0218858 I
GK16863 Drosophila willistoni FBgn0218863 I
GL16678 Drosophila persimilis FBgn0154282 I
GL25461 Drosophila persimilis FBgn0163045 I
GM14236 Drosophila sechellia FBgn0169162 I
GM14241 Drosophila sechellia FBgn0169167 I
HHAL003166-PA Halyomorpha halys HHAL003166-PA I
HMEL008789 Heliconius melpomene HMEL008789 I
Hsal_00151--XP_001121063.1_APIME Harpegnathos saltator Hsal_00151--XP_001121063.1_APIME I
KGM_03925 Danaus plexippus KGM_03925 I
L798_02764 Zootermopsis nevadensis L798_02764 I
LCUP006237 Lucilia cuprina LCUP006237 I
LCUP015100 Lucilia cuprina LCUP015100 I
LDEC013196 Leptinotarsa decemlineata LDEC013196 I
MCINX015686 Melitaea cinxia MCINX015686 I
MDOA008247 Musca domestica MDOA008247 I
MDOA013491 Musca domestica MDOA013491 I
MESCA009218 Megaselia scalaris MESCA009218 I
NV19234 Nasonia vitripennis NV19234 I
PHUM501420 Pediculus humanus PHUM501420 I
PPAI009278 Phlebotomus papatasi PPAI009278 I
RPRC003948 Rhodnius prolixus RPRC003948 I
SINV15831 Solenopsis invicta SINV15831 I
TC003627 Tribolium castaneum TC003627 I
YQE_07459 Dendroctonus ponderosae YQE_07459 I