estExt_fgenesh2_pg.C_630107 (Branchiostoma floridae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_fgenesh2_pg.C_630107 T334028_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_630107 Sox 7 73

Links

Other Sox family TFs
Other Branchiostoma floridae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_21694 Phytophthora parasitica F443_21694 N
fgenesh_scip_prom.28083.4621 Phytophthora lateralis fgenesh_scip_prom.28083.4621 N
fgenesh_scip_prom.46568.8623 Phytophthora kernoviae fgenesh_scip_prom.46568.8623 N
maker-pir_contig_57-snap-gene-0.21 Pythium irregulare maker-pir_contig_57-snap-gene-0.21 N
maker-piw_contig_2-fgenesh-gene-0.31 Pythium iwayamai maker-piw_contig_2-fgenesh-gene-0.31 N
Phyra79678 Phytophthora ramorum Phyra79678 N
PITG_08770 Phytophthora infestans PITG_08770 N
PYU1_G000053 Pythium ultimum PYU1_G000053 N