CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-pir_contig_57-snap-gene-0.21
(
Pythium irregulare
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
maker-pir_contig_57-snap-gene-0.21
T026901_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000014689
BED ZF
20
57
LFPDFSPEDAGSRVCLLCATKLKDKTHNLTRHLERHHV
Links
Other
BED ZF
family TFs
Other
Pythium irregulare
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-piw_contig_2-fgenesh-gene-0.31
Pythium iwayamai
maker-piw_contig_2-fgenesh-gene-0.31
N
0.947
Phyra79678
Phytophthora ramorum
Phyra79678
N
0.842
PITG_08770
Phytophthora infestans
PITG_08770
N
0.816
PYU1_G000053
Pythium ultimum
PYU1_G000053
N
0.816
Physo132796
Phytophthora sojae
Physo132796
N
0.784
F443_21694
Phytophthora parasitica
F443_21694
N
0.763
fgenesh_scip_prom.28083.4621
Phytophthora lateralis
fgenesh_scip_prom.28083.4621
N
0.763
fgenesh_scip_prom.46568.8623
Phytophthora kernoviae
fgenesh_scip_prom.46568.8623
N
0.763