CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_11188
(
Mucor circinelloides
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_Genewise1.C_11188
T334063_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_11188
Sox
52
120
PKQPPSNFFLFSNAIREQVDKQHPDASFTEKSKIYGARWRKLSEEQKKPYTELARIEREKYLKELALYE
Links
Other
Sox
family TFs
Other
Mucor circinelloides
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP19638
Atta cephalotes
ACEP19638
I
0.419
ASIM_0001958001
Anisakis simplex
ASIM_0001958001
N
0.415
BGLB005856
Biomphalaria glabrata
BGLB005856
N
0.432
BGLB012439
Biomphalaria glabrata
BGLB012439
N
0.432
Cflo_00230--XP_624018.2_APIME
Camponotus floridanus
Cflo_00230--XP_624018.2_APIME
N
0.420
RO3G_09013
Rhizopus oryzae
RO3G_09013
N
0.454