CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB012439
(
Biomphalaria glabrata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BGLB012439
T335823_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB012439-PA
Sox
125
193
PKQPLSGYLRFLNERRELIRQEKPNLSFAEMSKQLGNEWSHLAQHEKQRYLDDAEREKEKYMKDLEAYK
Links
Other
Sox
family TFs
Other
Biomphalaria glabrata
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB005856
Biomphalaria glabrata
BGLB005856
N
0.741
Ocbimv22031259m.g
Octopus bimaculoides
Ocbimv22031259m.g
I
0.475
GUITHDRAFT_40385
Guillardia theta
GUITHDRAFT_40385
N
0.442
LotgiG196090
Lottia gigantea
LotgiG196090
I
0.438
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
0.433
estExt_Genewise1.C_11188
Mucor circinelloides
estExt_Genewise1.C_11188
N
0.432
GB41600
Apis mellifera
GB41600
I
0.428
Hsal_13222--XP_625193.1_APIME
Harpegnathos saltator
Hsal_13222--XP_625193.1_APIME
I
0.428
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
0.426
SMU15029818
Schmidtea mediterranea
SMU15029818
I
0.426
RO3G_09013
Rhizopus oryzae
RO3G_09013
N
0.422
nLs.2.1.2.g04689
Litomosoides sigmodontis
nLs.2.1.2.g04689
N
0.422
ASIM_0001958001
Anisakis simplex
ASIM_0001958001
N
0.420
CapteG155070
Capitella teleta
CapteG155070
I
0.419
HMEL017569
Heliconius melpomene
HMEL017569
I
0.418