estExt_Genewise1.C_610004 (Physcomitrella patens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_Genewise1.C_610004 T334067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_610004 Sox 144 210
estExt_Genewise1.C_610004 Sox 263 329
estExt_Genewise1.C_610004 Sox 407 475

Links

Other Sox family TFs
Other Physcomitrella patens TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05447 Capronia coronata A1O1_05447 I
A1O3_09301 Capronia epimyces A1O3_09301 N
A1O7_06912 Cladophialophora yegresii A1O7_06912 N
A1O9_12160 Exophiala aquamarina A1O9_12160 N
AFUA_2G14680 Aspergillus fumigatus CADAFUAG00004828 N
ARB_03643 Arthroderma benhamiae ARB_03643 I
BDDG_01351 Blastomyces dermatitidis BDDG_01351 N
CADANGAG00012050 Aspergillus niger CADANGAG00012050 N
CADAORAG00008810 Aspergillus oryzae CADAORAG00008810 I
CIMG_02371 Coccidioides immitis CIMG_02371 N
CPC735_040120 Coccidioides posadasii CPC735_040120 N
EPUS_06691 Endocarpon pusillum EPUS_06691 N
EURHEDRAFT_518989 Aspergillus ruber EURHEDRAFT_518989 I
fgenesh1_pg.00815_#_163 Aspergillus carbonarius fgenesh1_pg.00815_#_163 N
flbB Aspergillus nidulans CADANIAG00000648 N
G647_03181 Cladophialophora carrionii G647_03181 I
H101_02270 Trichophyton interdigitale H101_02270 I
H102_06775 Trichophyton rubrum H102_06775 I
H105_06815 Trichophyton soudanense H105_06815 I
HCBG_09056 Histoplasma capsulatum HCBG_09056 N
HMPREF1120_07543 Exophiala dermatitidis HMPREF1120_07543 N
HMPREF1541_10536 Cyphellophora europaea HMPREF1541_10536 N
MGYG_05249 Microsporum gypseum MGYG_05249 N
NFIA_089910 Neosartorya fischeri CADNFIAG00007772 N
PAAG_01697 Paracoccidioides sp lutzii PAAG_01697 N
PABG_03746 Paracoccidioides brasiliensis PABG_03746 N
PDIP_02990 Penicillium digitatum PDIP_02990 I
PITC_020790 Penicillium italicum PITC_020790 I
PODANS_1_17900 Podospora anserina PODANS_1_17900 I
PV04_07337 Capronia semiimmersa PV04_07337 N
PV05_10158 Exophiala xenobiotica PV05_10158 N
PV07_11049 Cladophialophora immunda PV07_11049 N
PV08_00976 Exophiala spinifera PV08_00976 N
PV10_03189 Exophiala mesophila PV10_03189 I
PV11_09613 Exophiala sideris PV11_09613 N
PVAR5_8450 Byssochlamys spectabilis PVAR5_8450 N
TEQG_00005 Trichophyton equinum TEQG_00005 I
TESG_03658 Trichophyton tonsurans TESG_03658 I
TRV_01964 Trichophyton verrucosum TRV_01964 I
U727_00431281371 Penicillium solitum U727_00431281371 I
Z517_02456 Fonsecaea pedrosoi Z517_02456 I
Z518_09586 Rhinocladiella mackenziei Z518_09586 N
Z519_07258 Cladophialophora bantiana Z519_07258 N