estExt_Genewise1.C_610004 (Physcomitrella patens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_Genewise1.C_610004 T334067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_610004 Sox 144 210
estExt_Genewise1.C_610004 Sox 263 329
estExt_Genewise1.C_610004 Sox 407 475

Links

Other Sox family TFs
Other Physcomitrella patens TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pm.scaffold_2000035 Physcomitrella patens fgenesh1_pm.scaffold_2000035 N 0.635
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.423
30190.m010807 Ricinus communis 30190.m010807 I 0.418
Cla011101 Citrullus lanatus Cla011101 I 0.415