fgenesh1_pm.scaffold_2000035 (Physcomitrella patens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 fgenesh1_pm.scaffold_2000035 T334127_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.scaffold_2000035 Sox 74 140
fgenesh1_pm.scaffold_2000035 Sox 193 256
fgenesh1_pm.scaffold_2000035 Sox 280 348

Links

Other Sox family TFs
Other Physcomitrella patens TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_Genewise1.C_610004 Physcomitrella patens estExt_Genewise1.C_610004 N 0.635