CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15031660
(
Schmidtea mediterranea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMU15031660
T335035_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15031660
Sox
593
662
PKKPLSAYILYSNDVRDEVKRSLPPGSSIGDIAKVIGERWKTVTDAEKTKYANIYKIEHQKYLEAMKKYE
Links
Other
Sox
family TFs
Other
Schmidtea mediterranea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_02181
Capronia coronata
A1O1_02181
I
A1O5_08472
Cladophialophora psammophila
A1O5_08472
I
A1O7_08064
Cladophialophora yegresii
A1O7_08064
I
AB05299.1
Alternaria brassicicola
AB05299.1
I
ANIA_00928
Aspergillus nidulans
CADANIAG00001727
D
AOL_s00097g406
Arthrobotrys oligospora
AOL_s00097g406
I
ATEG_05199
Aspergillus terreus
CADATEAG00005112
I
AUEXF2481DRAFT_6834
Aureobasidium subglaciale
AUEXF2481DRAFT_6834
I
BAUCODRAFT_78015
Baudoinia compniacensis
BAUCODRAFT_78015
I
BBA_00861
Beauveria bassiana
BBA_00861
I
CADAFLAG00001126
Aspergillus flavus
CADAFLAG00001126
I
CADANGAG00001424
Aspergillus niger
CADANGAG00001424
I
CCM_05638
Cordyceps militaris
CCM_05638
I
CIMG_03081
Coccidioides immitis
CIMG_03081
I
COCC4DRAFT_176529
Bipolaris maydis
COCC4DRAFT_176529
I
COCCADRAFT_31801
Bipolaris zeicola
COCCADRAFT_31801
I
COCMIDRAFT_84450
Bipolaris oryzae
COCMIDRAFT_84450
I
COCSADRAFT_266185
Bipolaris sorokiniana
COCSADRAFT_266185
I
COCVIDRAFT_14051
Bipolaris victoriae
COCVIDRAFT_14051
I
CPC735_010610
Coccidioides posadasii
CPC735_010610
I
CTHT_0068120
Chaetomium thermophilum
CTHT_0068120
N
DOTSEDRAFT_69884
Dothistroma septosporum
DOTSEDRAFT_69884
I
estExt_Genewise1Plus.C_140773
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_140773
I
estExt_Genewise1Plus.C_80383
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_80383
I
estExt_Genewise1Plus.C_chr_20926
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_20926
I
EURHEDRAFT_408126
Aspergillus ruber
EURHEDRAFT_408126
I
fgenesh1_pm.00042_#_359
Aspergillus carbonarius
fgenesh1_pm.00042_#_359
I
G647_07030
Cladophialophora carrionii
G647_07030
I
GSTUM_00002996001
Tuber melanosporum
GSTUM_00002996001
I
H072_4801
Dactylellina haptotyla
H072_4801
I
H101_06251
Trichophyton interdigitale
H101_06251
I
H102_00463
Trichophyton rubrum
H102_00463
I
H105_00452
Trichophyton soudanense
H105_00452
I
HCBG_01324
Histoplasma capsulatum
HCBG_01324
I
HMPREF1120_02532
Exophiala dermatitidis
HMPREF1120_02532
I
LEMA_P088770.1
Leptosphaeria maculans
LEMA_P088770.1
I
M437DRAFT_69925
Aureobasidium melanogenum
M437DRAFT_69925
I
M438DRAFT_354976
Aureobasidium pullulans
M438DRAFT_354976
I
MCYG_00067
Microsporum canis
MCYG_00067
I
MCYG_00067
Arthroderma otae
MCYG_00067
I
MGYG_07139
Microsporum gypseum
MGYG_07139
I
MPH_10551
Macrophomina phaseolina
MPH_10551
I
MYCFIDRAFT_210457
Pseudocercospora fijiensis
MYCFIDRAFT_210457
I
Mycgr3G68239
Zymoseptoria tritici
Mycgr3G68239
I
OIDMADRAFT_38504
Oidiodendron maius
OIDMADRAFT_38504
I
PAAG_05307
Paracoccidioides sp lutzii
PAAG_05307
I
PABG_06059
Paracoccidioides brasiliensis
PABG_06059
I
Pc16g14610
Penicillium chrysogenum
Pc16g14610
I
PCH_Pc16g14610
Penicillium rubens
PCH_Pc16g14610
I
PDE_00510
Penicillium oxalicum
PDE_00510
I
PDIP_65580
Penicillium digitatum
PDIP_65580
I
PEX1_005990
Penicillium expansum
PEX1_005990
I
PITC_097670
Penicillium italicum
PITC_097670
I
PTRG_10554
Pyrenophora triticirepentis
PTRG_10554
I
PTT_02242
Pyrenophora teres
PTT_02242
I
PV04_08584
Capronia semiimmersa
PV04_08584
I
PV06_02457
Exophiala oligosperma
PV06_02457
I
PV07_01284
Cladophialophora immunda
PV07_01284
I
PV09_08665
Verruconis gallopava
PV09_08665
I
S40285_00002
Stachybotrys chlorohalonata
S40285_00002
I
S40288_05664
Stachybotrys chartarum
S40288_05664
I
SEPMUDRAFT_123488
Sphaerulina musiva
SEPMUDRAFT_123488
I
SETTUDRAFT_32470
Setosphaeria turcica
SETTUDRAFT_32470
I
SNOG_02470
Phaeosphaeria nodorum
SNOG_02470
I
TESG_03220
Trichophyton tonsurans
TESG_03220
I
U727_00430440431
Penicillium solitum
U727_00430440431
I
UCRNP2_1469
Neofusicoccum parvum
UCRNP2_1469
I
UREG_02875
Uncinocarpus reesii
UREG_02875
I
W97_01407
Coniosporium apollinis
W97_01407
I