CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15031660
(
Schmidtea mediterranea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMU15031660
T335035_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15031660
Sox
593
662
PKKPLSAYILYSNDVRDEVKRSLPPGSSIGDIAKVIGERWKTVTDAEKTKYANIYKIEHQKYLEAMKKYE
Links
Other
Sox
family TFs
Other
Schmidtea mediterranea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.456
Aqu1.209664
Amphimedon queenslandica
Aqu1.209664
N
0.446
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.433
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.422
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.422
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.419
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.415