CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000856901
(
Syphacia muris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMUV_0000856901
T336969_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000856901-mRNA-1
Sox
573
639
PKKPQTAYFLWFRDNHAALKKEGGTASEVAQRGGKLWRELDEETKQKYEKRAAEDRERYAKEMKEYK
Links
Other
Sox
family TFs
Other
Syphacia muris
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.729
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.513
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
0.497
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.497
L892_g15959
Steinernema scapterisci
L892_g15959
N
0.482
L892_g26355
Steinernema scapterisci
L892_g26355
N
0.482
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.476
Minc01744
Meloidogyne incognita
Minc01744
N
0.476
Minc10016
Meloidogyne incognita
Minc10016
N
0.476
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.474
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.474
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.474
MhA1_Contig128.frz3.gene5
Meloidogyne hapla
MhA1_Contig128.frz3.gene5
N
0.470
MhA1_Contig2971.frz3.fgene1
Meloidogyne hapla
MhA1_Contig2971.frz3.fgene1
N
0.470
Bm2524
Brugia malayi
Bm2524
N
0.468
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.468
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.467
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.463
LOAG_04347
Loa loa
LOAG_04347
N
0.463
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.463
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.463
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.463
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.463
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.460
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.460
ASU_13985
Ascaris suum
ASU_13985
N
0.460
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.460
CRE03995
Caenorhabditis remanei
CRE03995
N
0.459
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.458
RSKR_0000472700
Rhabditophanes kr3021
RSKR_0000472700
N
0.457
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.456
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.456
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.450
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.450
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.450
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.450
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.436
PPA02261
Pristionchus pacificus
PPA02261
N
0.435
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.435
L596_g20063
Steinernema carpocapsae
L596_g20063
N
0.435
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.435
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.435
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.435
L893_g3116
Steinernema glaseri
L893_g3116
N
0.434
LCUP005047
Lucilia cuprina
LCUP005047
N
0.433
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.431
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.431
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.431
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.431
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.431
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.431
CJA19030
Caenorhabditis japonica
CJA19030
N
0.430
MDOA007633
Musca domestica
MDOA007633
N
0.430
SMU15031660
Schmidtea mediterranea
SMU15031660
N
0.422
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.422
tetur01g10640
Tetranychus urticae
tetur01g10640
N
0.421
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.419
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.418
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.417
L898_g26664
Steinernema monticolum
L898_g26664
N
0.416