CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0536900
(
Strongyloides venezuelensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SVE_0536900
T337066_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0536900.1
Sox
30
96
PKKALSAYFLWLNDNRETIKKPGMGVADVAKAAGLIWREMRAEDKAKWEKKAEDDKRRYASELENYK
Links
Other
Sox
family TFs
Other
Strongyloides venezuelensis
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.741
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.722
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.708
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.579
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.556
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.556
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.556
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.551
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.551
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.551
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.551
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.551
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.551
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.551
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.551
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.545
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.545
NECAME_17555
Necator americanus
NECAME_17555
N
0.537
NECAME_17981
Necator americanus
NECAME_17981
N
0.537
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.534
BXY_0253100
Bursaphelenchus xylophilus
BXY_0253100
N
0.534
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.534
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.518
CRE11852
Caenorhabditis remanei
CRE11852
N
0.516
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.513
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.513
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.513
L893_g29974
Steinernema glaseri
L893_g29974
N
0.513
L898_g4830
Steinernema monticolum
L898_g4830
N
0.513
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.512
ASU_09087
Ascaris suum
ASU_09087
N
0.512
ASIM_0001147101
Anisakis simplex
ASIM_0001147101
N
0.511
ASU_05994
Ascaris suum
ASU_05994
N
0.511
L889_g9094
Steinernema feltiae
L889_g9094
N
0.511
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.511
Minc03634
Meloidogyne incognita
Minc03634
N
0.510
Minc04648
Meloidogyne incognita
Minc04648
N
0.510
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.510
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.510
CJA04355
Caenorhabditis japonica
CJA04355
N
0.508
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.508
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.508
NECAME_16525
Necator americanus
NECAME_16525
N
0.508
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.508
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.507
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.506
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.504
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.501
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.497
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.497
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.497
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.497
L893_g23503
Steinernema glaseri
L893_g23503
N
0.497
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.497
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.497
PPA06513
Pristionchus pacificus
PPA06513
N
0.495
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.495
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.495
CJA19030
Caenorhabditis japonica
CJA19030
N
0.494
L892_g15959
Steinernema scapterisci
L892_g15959
N
0.492
L892_g26355
Steinernema scapterisci
L892_g26355
N
0.492
L889_g16198
Steinernema feltiae
L889_g16198
N
0.491
L898_g7743
Steinernema monticolum
L898_g7743
N
0.491
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.490
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.490
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.490
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.490
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.490
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.490
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.490
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.490
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.488
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.488
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.488
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.488
CRE03995
Caenorhabditis remanei
CRE03995
N
0.487
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.487
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.486
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.486
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.485
Bm2524
Brugia malayi
Bm2524
N
0.485
LOAG_04347
Loa loa
LOAG_04347
N
0.485
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.485
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.485
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.485
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.485
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.485
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.485
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.482
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.479
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.477
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.477
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.474
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.471
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.471
CapteG172235
Capitella teleta
CapteG172235
I
0.463
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.455
EBI_27337
Enterocytozoon bieneusi
EBI_27337
N
0.454
EBI_27667
Enterocytozoon bieneusi
EBI_27667
N
0.454
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.454
GL11071
Drosophila persimilis
FBgn0148681
N
0.454
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.454
KGM_13852
Danaus plexippus
KGM_13852
I
0.453
MCINX001064
Melitaea cinxia
MCINX001064
I
0.453
L893_g3116
Steinernema glaseri
L893_g3116
N
0.453
Bm8632
Brugia malayi
Bm8632
N
0.452
LOAG_08062
Loa loa
LOAG_08062
N
0.452
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.452
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.452
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.452
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.452
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.452
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.451
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.451
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.451
ASU_13985
Ascaris suum
ASU_13985
N
0.451
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.451
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.449
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.446
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.445
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.443
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.441
L889_g29516
Steinernema feltiae
L889_g29516
N
0.437
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.436
TsM_000111500
Taenia solium
TsM_000111500
N
0.436
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.434
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.432
D915_02473
Fasciola hepatica
D915_02473
N
0.432
ECPE_0000536801
Echinostoma caproni
ECPE_0000536801
N
0.432
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.431
CLEC003860
Cimex lectularius
CLEC003860
I
0.431
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.427
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
0.426
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.426
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.425
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.425
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.424
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.424
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.423
EBI_25702
Enterocytozoon bieneusi
EBI_25702
N
0.423
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.423
L596_g20063
Steinernema carpocapsae
L596_g20063
N
0.423
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.423
PIIN_05794
Piriformospora indica
PIIN_05794
I
0.421
PPA02261
Pristionchus pacificus
PPA02261
N
0.421
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.421
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.420
GF12460
Drosophila ananassae
FBgn0089497
N
0.420
GG19998
Drosophila erecta
FBgn0112197
N
0.420
GD25013
Drosophila simulans
FBgn0196325
N
0.420
GJ21774
Drosophila virilis
FBgn0208892
N
0.420
GE11532
Drosophila yakuba
FBgn0229332
N
0.420
MDOA007633
Musca domestica
MDOA007633
N
0.420
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.420
M408DRAFT_328926
Serendipita vermifera
M408DRAFT_328926
I
0.419
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.417
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.417
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.417
A_01848
Schistosoma haematobium
A_01848
N
0.417
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.417
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.417
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.416
HmgZ
Drosophila yakuba
FBgn0068145
I
0.416
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.416
GF11622
Drosophila ananassae
FBgn0088662
I
0.416
GG20749
Drosophila erecta
FBgn0112936
I
0.416
GH20784
Drosophila grimshawi
FBgn0128247
I
0.416
GI20867
Drosophila mojavensis
FBgn0143601
I
0.416
GL17523
Drosophila persimilis
FBgn0155126
I
0.416
GM15692
Drosophila sechellia
FBgn0170608
I
0.416
GD25171
Drosophila simulans
FBgn0196483
I
0.416
GJ20604
Drosophila virilis
FBgn0207743
I
0.416
GK15658
Drosophila willistoni
FBgn0217663
I
0.416
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.416