M408DRAFT_328926 (Serendipita vermifera)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 M408DRAFT_328926 T331035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.433 0.594
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.433 0.594
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.427 0.522
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.427 0.522
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIM29253 Sox 23 91

Links

Other Sox family TFs
Other Serendipita vermifera TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PIIN_05794 Piriformospora indica PIIN_05794 I 0.724
JAAARDRAFT_49184 Jaapia argillacea JAAARDRAFT_49184 I 0.513
PILCRDRAFT_812728 Piloderma croceum PILCRDRAFT_812728 I 0.505
M378DRAFT_77996 Amanita muscaria M378DRAFT_77996 I 0.498
M413DRAFT_45791 Hebeloma cylindrosporum M413DRAFT_45791 I 0.479
PLEOSDRAFT_1048718 Pleurotus ostreatus PLEOSDRAFT_1048718 I 0.479
GALMADRAFT_227783 Galerina marginata GALMADRAFT_227783 I 0.479
LACBIDRAFT_184303 Laccaria bicolor LACBIDRAFT_184303 I 0.476
K443DRAFT_671387 Laccaria amethystina K443DRAFT_671387 I 0.476
CC1G_11882 Coprinopsis cinerea CC1G_11882 I 0.471
PLICRDRAFT_46399 Plicaturopsis crispa PLICRDRAFT_46399 I 0.471
GLOTRDRAFT_99857 Gloeophyllum trabeum GLOTRDRAFT_99857 I 0.471
AGABI2DRAFT_56560 Agaricus bisporus AGABI2DRAFT_56560 I 0.471
Bo7g091510 Brassica oleracea Bo7g091510 N 0.468
Bra025350 Brassica rapa Bra025350 N 0.468
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.464
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.464
A1Q1_01571 Trichosporon asahii A1Q1_01571 I 0.461
MSY001_2636 Malassezia sympodialis MSY001_2636 I 0.461
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.457
PAN0_004d2231 Pseudozyma antarctica PAN0_004d2231 I 0.456
UM02364 Ustilago maydis UM02364 I 0.456
PSEUBRA_SCAF4g05002 Pseudozyma brasiliensis PSEUBRA_SCAF4g05002 I 0.456
PaG_04789 Pseudozyma aphidis PaG_04789 I 0.456
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.455
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.455
DACRYDRAFT_23197 Dacryopinax sp DACRYDRAFT_23197 I 0.453
CERSUDRAFT_85760 Ceriporiopsis subvermispora CERSUDRAFT_85760 I 0.453
BN946_scf184999.g62 Trametes cinnabarina BN946_scf184999.g62 I 0.453
DICSQDRAFT_109066 Dichomitus squalens DICSQDRAFT_109066 I 0.453
FIBRA_06299 Fibroporia radiculosa FIBRA_06299 I 0.453
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.452
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.449
SERLA73DRAFT_187779 Serpula lacrymans SERLA73DRAFT_187779 I 0.449
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.449
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.445
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.445
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.445
sr13567 Sporisorium reilianum sr13567 I 0.444
PHLGIDRAFT_113118 Phlebiopsis gigantea PHLGIDRAFT_113118 I 0.442
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.442
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.441
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.441
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.440
PHSY_006278 Pseudozyma hubeiensis PHSY_006278 I 0.438
Moror_35 Moniliophthora roreri Moror_35 I 0.437
L804_02852 Cryptococcus gattii L804_02852 I 0.437
CNF04730 Cryptococcus neoformans CNF04730 I 0.437
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.435
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.434
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.433
NHP6A Saccharomyces cerevisiae YPR052C D 0.433
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.433
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.433
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.433
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.433
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.433
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.433
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.433
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.433
CRE14258 Caenorhabditis remanei CRE14258 N 0.429
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.429
CJA03316 Caenorhabditis japonica CJA03316 N 0.429
CBN31697 Caenorhabditis brenneri CBN31697 N 0.429
CBN07735 Caenorhabditis brenneri CBN07735 N 0.429
CJA30740 Caenorhabditis japonica CJA30740 N 0.429
CBG11867 Caenorhabditis briggsae CBG11867 N 0.429
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.428
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.427
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.427
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.427
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.427
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.427
TVAG_453060 Trichomonas vaginalis TVAG_453060 N 0.427
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.427
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.426
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.426
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.426
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.426
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.426
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.426
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.426
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.426
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.426
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.426
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.426
UHOR_03854 Ustilago hordei UHOR_03854 I 0.425
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.424
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.421
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.420
SCHCODRAFT_76744 Schizophyllum commune SCHCODRAFT_76744 I 0.420
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.419
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.419
29822.m003476 Ricinus communis 29822.m003476 I 0.419
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.419
K437DRAFT_218621 Tilletiaria anomala K437DRAFT_218621 N 0.418
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.418
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.418
M404DRAFT_29654 Pisolithus tinctorius M404DRAFT_29654 I 0.417
PISMIDRAFT_678929 Pisolithus microcarpus PISMIDRAFT_678929 I 0.417
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.417
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.417
gw1.16.190.1 Phycomyces blakesleeanus gw1.16.190.1 N 0.415