RO3G_16060 (Rhizopus oryzae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 RO3G_16060 T326120_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.491 0.507
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_16059 Sox 170 236

Links

Other Sox family TFs
Other Rhizopus oryzae TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.699
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.677
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.637
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.625
e_gw1.30.104.1 Phycomyces blakesleeanus e_gw1.30.104.1 N 0.597
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.577
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.552
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.550
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.547
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.545
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.533
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.532
gw1.16.190.1 Phycomyces blakesleeanus gw1.16.190.1 N 0.529
MVLG_01270 Microbotryum violaceum MVLG_01270 I 0.519
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.517
LCUP006200 Lucilia cuprina LCUP006200 N 0.514
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.491
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.491
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.491
NCU02819 Neurospora crassa NCU02819 D 0.491
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.488
PGTG_10028 Puccinia graminis PGTG_10028 I 0.486
PGTG_12120 Puccinia graminis PGTG_12120 I 0.486
EV44_g2383 Erysiphe necator EV44_g2383 I 0.485
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.478
MELLADRAFT_85039 Melampsora laricipopulina MELLADRAFT_85039 I 0.478
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.476
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.472
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.470
PV04_00198 Capronia semiimmersa PV04_00198 I 0.470
PV07_09313 Cladophialophora immunda PV07_09313 I 0.470
PV10_01993 Exophiala mesophila PV10_01993 I 0.470
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.470
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.470
ADAC003252 Anopheles darlingi ADAC003252 I 0.468
AGAP000281 Anopheles gambiae AGAP000281 I 0.468
BGIBMGA006848 Bombyx mori BGIBMGA006848 I 0.468
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I 0.468
tox4a Gasterosteus aculeatus ENSGACG00000014107 I 0.468
HMEL005034 Heliconius melpomene HMEL005034 I 0.468
ISCW018867 Ixodes scapularis ISCW018867 I 0.468
KGM_14572 Danaus plexippus KGM_14572 I 0.468
LotgiG109021 Lottia gigantea LotgiG109021 I 0.468
MCINX005468 Melitaea cinxia MCINX005468 I 0.468
NV10488 Nasonia vitripennis NV10488 I 0.468
RPRC000650 Rhodnius prolixus RPRC000650 I 0.468
TC012723 Tribolium castaneum TC012723 I 0.468
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I 0.468
CLEC001918 Cimex lectularius CLEC001918 I 0.468
HHAL000823-PA Halyomorpha halys HHAL000823-PA I 0.468
AALB006415 Anopheles albimanus AALB006415 I 0.468
AARA010616 Anopheles arabiensis AARA010616 I 0.468
AATE016215 Anopheles atroparvus AATE016215 I 0.468
ACUA004409 Anopheles culicifacies ACUA004409 I 0.468
AFAF011136 Anopheles farauti AFAF011136 I 0.468
AMEC012857 Anopheles melas AMEC012857 I 0.468
AMEM006878 Anopheles merus AMEM006878 I 0.468
ASIS016667 Anopheles sinensis ASIS016667 I 0.468
ASTEI07799 Anopheles stephensi ASTEI07799 I 0.468
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I 0.468
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I 0.468
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.466
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I 0.463
CGI_10017717 Crassostrea gigas CGI_10017717 I 0.463
PAAG_05470 Paracoccidioides sp lutzii PAAG_05470 N 0.463
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I 0.462
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.462
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I 0.460
GB43084 Apis mellifera GB43084 I 0.460
MBM_02410 Marssonina brunnea MBM_02410 I 0.458
O9G_002262 Rozella allomycis O9G_002262 I 0.458
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.458
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.458
VDBG_04589 Verticillium albo atrum VDBG_04589 I 0.455
ISCW015985 Ixodes scapularis ISCW015985 N 0.455
M408DRAFT_328926 Serendipita vermifera M408DRAFT_328926 I 0.455
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N 0.455
VDAG_04140 Verticillium dahliae VDAG_04140 I 0.455
VDAG_09161 Verticillium dahliae VDAG_09161 I 0.455
VDBG_04589 Verticillium alfalfae VDBG_04589 I 0.455
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N 0.455
D918_09264 Trichuris suis D918_09264 N 0.455
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N 0.455
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N 0.455
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.453
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I 0.452
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.452
M7I_1578 Glarea lozoyensis M7I_1578 I 0.451
PIIN_05794 Piriformospora indica PIIN_05794 I 0.450
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I 0.448
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I 0.448
CH063_04081 Colletotrichum higginsianum CH063_04081 I 0.448
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I 0.448
GLRG_01394 Colletotrichum graminicola GLRG_01394 I 0.448
W97_04202 Coniosporium apollinis W97_04202 I 0.448
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I 0.446
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I 0.446
S40288_09735 Stachybotrys chartarum S40288_09735 I 0.446
V499_08602 Pseudogymnoascus pannorum V499_08602 I 0.446
MDOA008605 Musca domestica MDOA008605 N 0.446
ENSCSAVG00000001086 Ciona savignyi ENSCSAVG00000001086 N 0.445
CCM_01555 Cordyceps militaris CCM_01555 I 0.444
MAJ_04030 Metarhizium majus MAJ_04030 I 0.444
MANI_030028 Metarhizium anisopliae MANI_030028 I 0.444
MBR_01483 Metarhizium brunneum MBR_01483 I 0.444
MGU_02157 Metarhizium guizhouense MGU_02157 I 0.444
X797_001988 Metarhizium robertsii X797_001988 I 0.444
A1O1_01197 Capronia coronata A1O1_01197 I 0.442
A1O3_08778 Capronia epimyces A1O3_08778 I 0.442
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.442
CMQ_8074 Grosmannia clavigera CMQ_8074 I 0.442
G647_10093 Cladophialophora carrionii G647_10093 I 0.442
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.442
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.442
PV06_04154 Exophiala oligosperma PV06_04154 I 0.442
PV08_04655 Exophiala spinifera PV08_04655 I 0.442
PV11_09703 Exophiala sideris PV11_09703 I 0.442
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.442
MGG_01641 Magnaporthe oryzae MGG_01641 I 0.441
BBA_01214 Beauveria bassiana BBA_01214 I 0.438
F503_04824 Ophiostoma piceae uamh F503_04824 I 0.438
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I 0.438
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.436
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.436
ACRE_011600 Acremonium chrysogenum ACRE_011600 I 0.435
EFV61455 Trichinella spiralis EFV61455 N 0.434
tox4b Danio rerio ENSDARG00000100163 I 0.434
tox2 Gasterosteus aculeatus ENSGACG00000006914 N 0.434
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.434
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N 0.434
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N 0.434
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N 0.434
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N 0.434
tox2 Oryzias latipes ENSORLG00000004818 N 0.434
tox4b Oryzias latipes ENSORLG00000008779 N 0.434
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N 0.434
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N 0.434
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N 0.434
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N 0.434
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N 0.434
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N 0.434
tox4b Takifugu rubripes ENSTRUG00000002594 N 0.434
tox2 Takifugu rubripes ENSTRUG00000013848 N 0.434
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N 0.434
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N 0.434
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N 0.434
tox4.S Xenopus laevis XB-GENE-993810 I 0.434
XP_002936155 Xenopus tropicalis XP_002936155 N 0.434
D917_02150 Trichinella nativa D917_02150 N 0.434
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.431
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N 0.431
CLEC003860 Cimex lectularius CLEC003860 I 0.429
EBI_27337 Enterocytozoon bieneusi EBI_27337 N 0.428
EBI_27667 Enterocytozoon bieneusi EBI_27667 N 0.428
VHEMI10573 Torrubiella hemipterigena VHEMI10573 I 0.427
SMU15029818 Schmidtea mediterranea SMU15029818 I 0.427
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N 0.427
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I 0.426
WUBG_03914 Wuchereria bancrofti WUBG_03914 N 0.425
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.425
Bm4188 Brugia malayi Bm4188 N 0.425
LOAG_18151 Loa loa LOAG_18151 N 0.425
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.425
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N 0.425
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N 0.425
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.425
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.425
EPUS_09213 Endocarpon pusillum EPUS_09213 I 0.422
mgf024995m Mimulus guttatus mgf024995m I 0.422
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N 0.421
FPSE_02664 Fusarium pseudograminearum FPSE_02664 I 0.421
W97_04667 Coniosporium apollinis W97_04667 N 0.421
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I 0.420
MESCA003479 Megaselia scalaris MESCA003479 N 0.420
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I 0.419
MPH_08050 Macrophomina phaseolina MPH_08050 I 0.419
SMU15031660 Schmidtea mediterranea SMU15031660 N 0.419
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N 0.419
ENSMMUG00000002541 Macaca mulatta ENSMMUG00000002541 I 0.418
OCS_01486 Ophiocordyceps sinensis OCS_01486 I 0.415