CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CLEC003860
(
Cimex lectularius
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
CLEC003860
T334773_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.548
0.493
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLEC003860-PA
Sox
555
621
PKRAPSAYMLWFNDSREKIKADNPGISFTDIAKKGGELWKNLSDKSEWEKKAAKLKEEYTQAMSEYK
Links
Other
Sox
family TFs
Other
Cimex lectularius
TFs
268 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.664
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.578
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.553
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.548
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.548
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.548
NCU02819
Neurospora crassa
NCU02819
D
0.548
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.535
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.533
HmgZ
Drosophila yakuba
FBgn0068145
I
0.533
GG20749
Drosophila erecta
FBgn0112936
I
0.533
GM15692
Drosophila sechellia
FBgn0170608
I
0.533
GD25171
Drosophila simulans
FBgn0196483
I
0.533
GK15658
Drosophila willistoni
FBgn0217663
I
0.533
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.533
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.533
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.529
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.529
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.529
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.528
GH20784
Drosophila grimshawi
FBgn0128247
I
0.528
GL17523
Drosophila persimilis
FBgn0155126
I
0.528
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.525
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.525
MDOA014797
Musca domestica
MDOA014797
I
0.522
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.517
ADAC005122
Anopheles darlingi
ADAC005122
N
0.511
AGAP012334
Anopheles gambiae
AGAP012334
N
0.511
AALB010797
Anopheles albimanus
AALB010797
N
0.511
AARA003413
Anopheles arabiensis
AARA003413
N
0.511
ACHR003270
Anopheles christyi
ACHR003270
N
0.511
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.511
ADIR000495
Anopheles dirus
ADIR000495
N
0.511
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.511
AFUN009599
Anopheles funestus
AFUN009599
N
0.511
AMAM007083
Anopheles maculatus
AMAM007083
N
0.511
AMEC017787
Anopheles melas
AMEC017787
N
0.511
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.511
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
0.509
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.509
GL11071
Drosophila persimilis
FBgn0148681
N
0.509
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.508
mgf024995m
Mimulus guttatus
mgf024995m
I
0.507
MDOA009531
Musca domestica
MDOA009531
N
0.507
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
0.506
SPBR_04745
Sporothrix brasiliensis
SPBR_04745
I
0.506
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.505
GF11622
Drosophila ananassae
FBgn0088662
I
0.505
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.505
MBM_02410
Marssonina brunnea
MBM_02410
I
0.505
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.505
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.505
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.504
AAEL002381
Aedes aegypti
AAEL002381
N
0.504
AAEL011414
Aedes aegypti
AAEL011414
N
0.504
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.504
MCINX001064
Melitaea cinxia
MCINX001064
I
0.504
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.503
ACEP16595
Atta cephalotes
ACEP16595
I
0.503
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.503
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.503
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.503
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.501
GI20867
Drosophila mojavensis
FBgn0143601
I
0.501
GJ20604
Drosophila virilis
FBgn0207743
I
0.501
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.501
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.501
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.501
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.501
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.501
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.501
X797_001988
Metarhizium robertsii
X797_001988
I
0.501
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.500
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.500
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.500
A1O1_01197
Capronia coronata
A1O1_01197
I
0.499
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.499
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.499
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.499
G647_10093
Cladophialophora carrionii
G647_10093
I
0.499
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.499
KGM_13852
Danaus plexippus
KGM_13852
I
0.499
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.499
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.499
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.499
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.499
PV10_01993
Exophiala mesophila
PV10_01993
I
0.499
PV11_09703
Exophiala sideris
PV11_09703
I
0.499
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.499
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.499
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.499
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.498
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.498
BBA_01214
Beauveria bassiana
BBA_01214
I
0.497
CCM_01555
Cordyceps militaris
CCM_01555
I
0.497
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.497
LCUP005047
Lucilia cuprina
LCUP005047
N
0.497
AAEL011425
Aedes aegypti
AAEL011425
I
0.495
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.495
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.495
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.495
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.495
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.495
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.495
CapteG172235
Capitella teleta
CapteG172235
I
0.494
PV08_04655
Exophiala spinifera
PV08_04655
I
0.494
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.492
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.489
GG19998
Drosophila erecta
FBgn0112197
N
0.487
GJ21774
Drosophila virilis
FBgn0208892
N
0.487
GE11532
Drosophila yakuba
FBgn0229332
N
0.487
MDOA007633
Musca domestica
MDOA007633
N
0.487
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.487
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.486
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.482
GF12460
Drosophila ananassae
FBgn0089497
N
0.482
GD25013
Drosophila simulans
FBgn0196325
N
0.482
VHEMI10573
Torrubiella hemipterigena
VHEMI10573
I
0.479
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.476
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.475
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.473
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.473
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.473
GH21151
Drosophila grimshawi
FBgn0128613
N
0.473
W97_04202
Coniosporium apollinis
W97_04202
I
0.471
TRIVIDRAFT_228694
Trichoderma virens
TRIVIDRAFT_228694
I
0.470
ADAC005115
Anopheles darlingi
ADAC005115
N
0.469
AALB010796
Anopheles albimanus
AALB010796
N
0.469
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.468
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.467
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.467
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.467
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.467
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.467
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.467
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.467
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.467
ENSCSAVG00000011755
Ciona savignyi
ENSCSAVG00000011755
N
0.465
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.464
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.463
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.463
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.463
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.462
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.462
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.462
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.461
KGM_13851
Danaus plexippus
KGM_13851
N
0.461
TC012866
Tribolium castaneum
TC012866
N
0.461
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.460
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.460
HmgD
Drosophila melanogaster
FBgn0004362
N
0.458
HmgD
Drosophila yakuba
FBgn0068146
N
0.458
GG22136
Drosophila erecta
FBgn0114310
N
0.458
GH21124
Drosophila grimshawi
FBgn0128586
N
0.458
GI18728
Drosophila mojavensis
FBgn0141467
N
0.458
GM13209
Drosophila sechellia
FBgn0168140
N
0.458
GM15859
Drosophila sechellia
FBgn0170775
N
0.458
GD11622
Drosophila simulans
FBgn0183362
N
0.458
GJ21748
Drosophila virilis
FBgn0208866
N
0.458
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.458
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.456
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.456
EPUS_09213
Endocarpon pusillum
EPUS_09213
I
0.455
GF13265
Drosophila ananassae
FBgn0090297
N
0.452
GK15924
Drosophila willistoni
FBgn0217926
N
0.452
PV09_06887
Verruconis gallopava
PV09_06887
I
0.452
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.452
Minc03634
Meloidogyne incognita
Minc03634
N
0.452
Minc04648
Meloidogyne incognita
Minc04648
N
0.452
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.452
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.452
PPA02261
Pristionchus pacificus
PPA02261
N
0.450
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.450
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.450
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.449
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.448
NECAME_16525
Necator americanus
NECAME_16525
N
0.448
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.448
GI18750
Drosophila mojavensis
FBgn0141489
N
0.447
LCUP016801
Lucilia cuprina
LCUP016801
N
0.447
XP_002159252.1
Hydra magnipapillata
XP_002159252.1
I
0.447
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.446
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
0.445
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.444
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.442
M438DRAFT_338286
Aureobasidium pullulans
M438DRAFT_338286
I
0.442
MPH_08050
Macrophomina phaseolina
MPH_08050
I
0.442
SapurV1A.3543s0020
Salix purpurea
SapurV1A.3543s0020
N
0.442
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.442
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.442
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.442
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.442
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.442
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.442
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.442
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.442
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.441
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.440
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.440
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.440
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.439
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
0.438
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.437
CRE03995
Caenorhabditis remanei
CRE03995
N
0.437
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.437
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.436
HMEL015307
Heliconius melpomene
HMEL015307
N
0.436
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.436
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.436
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
0.436
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.436
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.436
NECAME_17555
Necator americanus
NECAME_17555
N
0.436
NECAME_17981
Necator americanus
NECAME_17981
N
0.436
COCC4DRAFT_135921
Bipolaris maydis
COCC4DRAFT_135921
I
0.435
COCMIDRAFT_97534
Bipolaris oryzae
COCMIDRAFT_97534
I
0.435
COCSADRAFT_180514
Bipolaris sorokiniana
COCSADRAFT_180514
I
0.435
COCSADRAFT_226282
Bipolaris sorokiniana
COCSADRAFT_226282
I
0.435
COCVIDRAFT_17843
Bipolaris victoriae
COCVIDRAFT_17843
I
0.435
LEMA_P064360.1
Leptosphaeria maculans
LEMA_P064360.1
I
0.435
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.435
PTRG_02818
Pyrenophora triticirepentis
PTRG_02818
I
0.435
PTT_17082
Pyrenophora teres
PTT_17082
I
0.435
SETTUDRAFT_157792
Setosphaeria turcica
SETTUDRAFT_157792
I
0.435
fgenesh1_pm.C_scaffold_14000132
Cochliobolus heterostrophus C5
fgenesh1_pm.C_scaffold_14000132
I
0.435
AB07914.1
Alternaria brassicicola
AB07914.1
I
0.435
ACEP19638
Atta cephalotes
ACEP19638
I
0.434
DAPPUDRAFT_201206
Daphnia pulex
DAPPUDRAFT_201206
N
0.434
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.433
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.431
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.431
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.431
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.429
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.429
ENSCJAG00000031139
Callithrix jacchus
ENSCJAG00000031139
I
0.429
POPTR_0017s11460
Populus trichocarpa
POPTR_0017s11460
I
0.429
SapurV1A.0447s0140
Salix purpurea
SapurV1A.0447s0140
I
0.429
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.429
GLYMA05G37010
Glycine max
GLYMA05G37010
I
0.428
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.428
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.427
PHUM125270
Pediculus humanus
PHUM125270
N
0.427
GL16947
Drosophila persimilis
FBgn0154551
N
0.426
GK22092
Drosophila willistoni
FBgn0224077
N
0.426
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.426
ISCW020032
Ixodes scapularis
ISCW020032
N
0.426
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.426
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
0.426
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.426
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.425
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.424
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.424
TsM_000111500
Taenia solium
TsM_000111500
N
0.424
GA20056
Drosophila pseudoobscura
FBgn0080052
N
0.423
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.422
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.422
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.421
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.421
D918_00495
Trichuris suis
D918_00495
N
0.419
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.419
CJA19030
Caenorhabditis japonica
CJA19030
N
0.417
Cla017295
Citrullus lanatus
Cla017295
I
0.417
Cucsa.339070
Cucumis sativus
Cucsa.339070
I
0.417
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.417
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.416
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.416
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.415
mgf001267m
Mimulus guttatus
mgf001267m
I
0.415