CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D918_00495
(
Trichuris suis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D918_00495
T336177_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D918_00495
Sox
528
592
PKKPQSAYLLWLKANRDAIKTEGMSFAEIGKKAGELWKNVTDKKKWEELARKDRERYQEEMSKYE
Links
Other
Sox
family TFs
Other
Trichuris suis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TMUE_s0047003600
Trichuris muris
TMUE_s0047003600
N
0.631
estExt_fgenesh1_pm.C_130068
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_130068
I
0.469
estExt_Genewise1.C_130158
Chlorella vulgaris
estExt_Genewise1.C_130158
I
0.469
O9G_002262
Rozella allomycis
O9G_002262
I
0.445
CAOG_07557
Capsaspora owczarzaki
CAOG_07557
N
0.432
EMIHUDRAFT_49282
Emiliania huxleyi
EMIHUDRAFT_49282
N
0.430
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.420
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.420
ASU_13985
Ascaris suum
ASU_13985
N
0.420
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.420
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.419
CLEC003860
Cimex lectularius
CLEC003860
I
0.419
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.419
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.415
Bm2524
Brugia malayi
Bm2524
N
0.415
LOAG_04347
Loa loa
LOAG_04347
N
0.415
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.415
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.415
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.415
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.415
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.415
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.415
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.415
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.415
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.415