CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000733200
(
Rhabditophanes kr3021
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RSKR_0000733200
T336872_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000733200.1
Sox
22
90
PKKALSAYFIWLSANRPALKEKNPGASVAVIAKAGGKEWNELSPDDKKTWELKAAEDKIRYSKAMESYK
Links
Other
Sox
family TFs
Other
Rhabditophanes kr3021
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSKR_0000171200
Rhabditophanes kr3021
RSKR_0000171200
N
0.624
RSKR_0000540800
Rhabditophanes kr3021
RSKR_0000540800
N
0.624
RSKR_0000472700
Rhabditophanes kr3021
RSKR_0000472700
N
0.591
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.541
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.534
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.534
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.534
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.530
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.530
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.530
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.530
Minc03634
Meloidogyne incognita
Minc03634
N
0.526
Minc04648
Meloidogyne incognita
Minc04648
N
0.526
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.526
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.526
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.524
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.521
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.518
Bm2524
Brugia malayi
Bm2524
N
0.518
LOAG_04347
Loa loa
LOAG_04347
N
0.518
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.518
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.518
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.518
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.518
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.511
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.509
CJA19030
Caenorhabditis japonica
CJA19030
N
0.501
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.495
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.494
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.490
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.476
AAEL011425
Aedes aegypti
AAEL011425
I
0.469
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.468
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.466
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.466
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.466
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.466
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.466
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.464
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.464
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.464
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.461
KGM_13852
Danaus plexippus
KGM_13852
I
0.461
MCINX001064
Melitaea cinxia
MCINX001064
I
0.461
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.461
NECAME_16525
Necator americanus
NECAME_16525
N
0.461
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.461
CLEC003860
Cimex lectularius
CLEC003860
I
0.460
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.457
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.457
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.456
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.456
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.455
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.455
CapteG172235
Capitella teleta
CapteG172235
I
0.453
PPA06513
Pristionchus pacificus
PPA06513
N
0.453
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.453
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.452
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.451
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.451
MBM_02410
Marssonina brunnea
MBM_02410
I
0.451
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.451
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.451
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.451
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.450
L889_g16198
Steinernema feltiae
L889_g16198
N
0.450
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.450
L893_g23503
Steinernema glaseri
L893_g23503
N
0.450
L898_g7743
Steinernema monticolum
L898_g7743
N
0.450
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.450
CRE03995
Caenorhabditis remanei
CRE03995
N
0.449
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.449
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.448
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.448
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.448
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.448
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.447
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.446
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.446
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.444
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.444
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.444
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.443
Bm8632
Brugia malayi
Bm8632
N
0.441
LOAG_08062
Loa loa
LOAG_08062
N
0.441
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.441
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.441
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.441
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.441
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.441
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.440
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.437
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.437
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.435
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.434
RO3G_15755
Rhizopus oryzae
RO3G_15755
I
0.433
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.431
GL11071
Drosophila persimilis
FBgn0148681
N
0.431
PGTG_10028
Puccinia graminis
PGTG_10028
I
0.431
PGTG_12120
Puccinia graminis
PGTG_12120
I
0.431
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.431
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.431
ASU_13985
Ascaris suum
ASU_13985
N
0.431
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.431
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.429
HmgZ
Drosophila yakuba
FBgn0068145
I
0.429
GF11622
Drosophila ananassae
FBgn0088662
I
0.429
GG20749
Drosophila erecta
FBgn0112936
I
0.429
GH20784
Drosophila grimshawi
FBgn0128247
I
0.429
GI20867
Drosophila mojavensis
FBgn0143601
I
0.429
GM15692
Drosophila sechellia
FBgn0170608
I
0.429
GD25171
Drosophila simulans
FBgn0196483
I
0.429
GJ20604
Drosophila virilis
FBgn0207743
I
0.429
GK15658
Drosophila willistoni
FBgn0217663
I
0.429
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.429
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.429
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.429
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.429
BXY_0253100
Bursaphelenchus xylophilus
BXY_0253100
N
0.428
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.428
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.428
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.428
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.428
LCUP016801
Lucilia cuprina
LCUP016801
N
0.427
ACYPI006576
Acyrthosiphon pisum
ACYPI006576
I
0.425
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.425
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.425
EBI_27337
Enterocytozoon bieneusi
EBI_27337
N
0.424
EBI_27667
Enterocytozoon bieneusi
EBI_27667
N
0.424
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.424
L889_g29516
Steinernema feltiae
L889_g29516
N
0.424
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.423
MDOA014797
Musca domestica
MDOA014797
I
0.423
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.423
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.422
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.421
GL17523
Drosophila persimilis
FBgn0155126
I
0.421
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.420
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.420
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.420
D918_00495
Trichuris suis
D918_00495
N
0.419
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.419
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.419
L889_g9094
Steinernema feltiae
L889_g9094
N
0.419
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.419
L893_g29974
Steinernema glaseri
L893_g29974
N
0.419
L898_g4830
Steinernema monticolum
L898_g4830
N
0.419
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.418
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.418
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.417
ASU_05994
Ascaris suum
ASU_05994
N
0.417
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.417
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.416
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.416
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.416
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.416
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.416
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.416
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.416
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.416
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.416
NECAME_17555
Necator americanus
NECAME_17555
N
0.416
NECAME_17981
Necator americanus
NECAME_17981
N
0.416
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.416
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.416
L596_g20063
Steinernema carpocapsae
L596_g20063
N
0.415