CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG09136
(
Caenorhabditis briggsae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CBG09136
T326855_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG09136
Sox
555
621
PKRAQSAYFHWFNANRLSLKEDGDSVADVAKKAGAKWKTLGAEDKKEWEAKAEKDKTRYETEMKEYR
Links
Other
Sox
family TFs
Other
Caenorhabditis briggsae
TFs
224 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.684
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.653
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.643
CJA19030
Caenorhabditis japonica
CJA19030
N
0.627
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.604
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.603
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.603
Minc03634
Meloidogyne incognita
Minc03634
N
0.601
Minc04648
Meloidogyne incognita
Minc04648
N
0.601
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.601
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.601
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.596
NECAME_16525
Necator americanus
NECAME_16525
N
0.596
CRE03995
Caenorhabditis remanei
CRE03995
N
0.578
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.574
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.566
L889_g29516
Steinernema feltiae
L889_g29516
N
0.542
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.539
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.537
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.533
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.533
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.533
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.533
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.533
PPA06513
Pristionchus pacificus
PPA06513
N
0.528
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.528
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.517
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.508
L889_g16198
Steinernema feltiae
L889_g16198
N
0.508
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.508
L893_g23503
Steinernema glaseri
L893_g23503
N
0.508
L898_g7743
Steinernema monticolum
L898_g7743
N
0.508
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.506
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.505
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.503
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.503
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.503
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.503
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.503
Bm8632
Brugia malayi
Bm8632
N
0.500
LOAG_08062
Loa loa
LOAG_08062
N
0.500
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.500
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.500
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.500
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.500
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.500
NECAME_17555
Necator americanus
NECAME_17555
N
0.499
NECAME_17981
Necator americanus
NECAME_17981
N
0.499
PPA02261
Pristionchus pacificus
PPA02261
N
0.498
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.498
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.497
ASU_09087
Ascaris suum
ASU_09087
N
0.497
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.497
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.494
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.493
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.492
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.492
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.492
L893_g29974
Steinernema glaseri
L893_g29974
N
0.492
L898_g4830
Steinernema monticolum
L898_g4830
N
0.492
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.492
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.492
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.492
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.492
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.491
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.491
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.491
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.491
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.491
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.491
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.491
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.491
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.491
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.491
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.490
Bm2524
Brugia malayi
Bm2524
N
0.490
LOAG_04347
Loa loa
LOAG_04347
N
0.490
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.490
ASU_05994
Ascaris suum
ASU_05994
N
0.490
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.490
L889_g9094
Steinernema feltiae
L889_g9094
N
0.490
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.490
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.490
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.490
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.490
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.490
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.489
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.489
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.486
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.486
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.486
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.486
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.484
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.484
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.484
ACAC_0000798501
Angiostrongylus cantonensis
ACAC_0000798501
N
0.482
ACOC_0001190001
Angiostrongylus costaricensis
ACOC_0001190001
N
0.482
CJA04355
Caenorhabditis japonica
CJA04355
N
0.481
CRE11852
Caenorhabditis remanei
CRE11852
N
0.481
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.479
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.479
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.477
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.475
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.474
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.474
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.474
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.472
EVEC_0000171701
Enterobius vermicularis
EVEC_0000171701
N
0.471
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.471
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.471
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.471
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.468
HmgZ
Drosophila yakuba
FBgn0068145
I
0.468
GF11622
Drosophila ananassae
FBgn0088662
I
0.468
GG20749
Drosophila erecta
FBgn0112936
I
0.468
GM15692
Drosophila sechellia
FBgn0170608
I
0.468
GD25171
Drosophila simulans
FBgn0196483
I
0.468
GK15658
Drosophila willistoni
FBgn0217663
I
0.468
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.468
LOAG_14354
Loa loa
LOAG_14354
N
0.467
Bm6643
Brugia malayi
Bm6643
N
0.464
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.463
GH20784
Drosophila grimshawi
FBgn0128247
I
0.463
GI20867
Drosophila mojavensis
FBgn0143601
I
0.463
GL17523
Drosophila persimilis
FBgn0155126
I
0.463
GJ20604
Drosophila virilis
FBgn0207743
I
0.463
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.463
MDOA014797
Musca domestica
MDOA014797
I
0.457
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.457
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.457
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.457
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.457
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.457
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.457
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.457
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.457
NECAME_10840
Necator americanus
NECAME_10840
N
0.457
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.457
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.457
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.457
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.457
HNAJ_0000793101
Hymenolepis nana
HNAJ_0000793101
I
0.456
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.456
SMUV_0000499601
Syphacia muris
SMUV_0000499601
N
0.454
SVUK_0001721701
Strongylus vulgaris
SVUK_0001721701
N
0.454
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.453
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.453
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.453
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.453
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.453
EVEC_0000079801
Enterobius vermicularis
EVEC_0000079801
N
0.453
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.452
HmgD
Drosophila melanogaster
FBgn0004362
N
0.451
HmgD
Drosophila yakuba
FBgn0068146
N
0.451
GF13265
Drosophila ananassae
FBgn0090297
N
0.451
GG22136
Drosophila erecta
FBgn0114310
N
0.451
GH21124
Drosophila grimshawi
FBgn0128586
N
0.451
GI18728
Drosophila mojavensis
FBgn0141467
N
0.451
GL16947
Drosophila persimilis
FBgn0154551
N
0.451
GM15859
Drosophila sechellia
FBgn0170775
N
0.451
GD11622
Drosophila simulans
FBgn0183362
N
0.451
GJ21748
Drosophila virilis
FBgn0208866
N
0.451
GK15924
Drosophila willistoni
FBgn0217926
N
0.451
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.451
GM13209
Drosophila sechellia
FBgn0168140
N
0.450
L596_g8199
Steinernema carpocapsae
L596_g8199
N
0.450
L892_g2503
Steinernema scapterisci
L892_g2503
N
0.450
ALUE_0000605501
Ascaris lumbricoides
ALUE_0000605501
N
0.448
ASU_07820
Ascaris suum
ASU_07820
N
0.448
A1O9_00742
Exophiala aquamarina
A1O9_00742
I
0.447
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.447
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.446
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.446
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.445
CLEC003860
Cimex lectularius
CLEC003860
I
0.442
HPBE_0001796801
Heligmosomoides bakeri
HPBE_0001796801
N
0.442
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.438
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.437
ALUE_0000448701
Ascaris lumbricoides
ALUE_0000448701
N
0.435
ASU_05752
Ascaris suum
ASU_05752
N
0.435
MCINX001064
Melitaea cinxia
MCINX001064
I
0.434
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.433
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.433
LCUP016801
Lucilia cuprina
LCUP016801
N
0.432
MDOA009531
Musca domestica
MDOA009531
N
0.432
TsM_000111500
Taenia solium
TsM_000111500
N
0.430
CapteG172235
Capitella teleta
CapteG172235
I
0.429
KGM_13852
Danaus plexippus
KGM_13852
I
0.429
ASIM_0001147101
Anisakis simplex
ASIM_0001147101
N
0.428
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.427
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.426
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.426
ASU_13985
Ascaris suum
ASU_13985
N
0.426
L889_g6592
Steinernema feltiae
L889_g6592
N
0.426
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.426
ANCDUO_24269
Ancylostoma duodenale
ANCDUO_24269
N
0.425
csin108029
Clonorchis sinensis
csin108029
N
0.425
T265_15460
Opisthorchis viverrini
T265_15460
N
0.425
ACEP16595
Atta cephalotes
ACEP16595
I
0.424
ASIM_0000156001
Anisakis simplex
ASIM_0000156001
N
0.424
gw1.20.66.1
Ostreococcus RCC809
gw1.20.66.1
N
0.423
AAEL011425
Aedes aegypti
AAEL011425
I
0.421
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.420
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.420
A_01848
Schistosoma haematobium
A_01848
N
0.420
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.420
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.420
EMIHUDRAFT_49282
Emiliania huxleyi
EMIHUDRAFT_49282
N
0.419
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.419
PPA14042
Pristionchus pacificus
PPA14042
N
0.418
ANCCAN_19939
Ancylostoma caninum
ANCCAN_19939
N
0.417
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.417
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.417
GPUH_0000029001
Gongylonema pulchrum
GPUH_0000029001
N
0.417
A1O1_01197
Capronia coronata
A1O1_01197
I
0.415
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.415
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.415
G647_10093
Cladophialophora carrionii
G647_10093
I
0.415
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.415
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.415
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.415
PV08_04655
Exophiala spinifera
PV08_04655
I
0.415
PV11_09703
Exophiala sideris
PV11_09703
I
0.415
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.415