gw1.20.66.1 (Ostreococcus RCC809)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.20.66.1 T334235_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.20.66.1 Sox 485 553

Links

Other Sox family TFs
Other Ostreococcus RCC809 TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1400010135 Ostreococcus tauri 1400010135 I 0.631
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.620
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.508
PV06_04154 Exophiala oligosperma PV06_04154 I 0.466
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.466
A1O1_01197 Capronia coronata A1O1_01197 I 0.466
PV08_04655 Exophiala spinifera PV08_04655 I 0.466
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.466
G647_10093 Cladophialophora carrionii G647_10093 I 0.466
A1O3_08778 Capronia epimyces A1O3_08778 I 0.466
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.466
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.466
PV11_09703 Exophiala sideris PV11_09703 I 0.466
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.452
maker-piw_contig_790-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_790-fgenesh-gene-0.2 N 0.445
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.442
SapurV1A.0447s0140 Salix purpurea SapurV1A.0447s0140 I 0.440
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.439
PV07_09313 Cladophialophora immunda PV07_09313 I 0.439
PV10_01993 Exophiala mesophila PV10_01993 I 0.439
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.439
X797_001988 Metarhizium robertsii X797_001988 I 0.439
PV04_00198 Capronia semiimmersa PV04_00198 I 0.439
MBR_01483 Metarhizium brunneum MBR_01483 I 0.439
MANI_030028 Metarhizium anisopliae MANI_030028 I 0.439
MGU_02157 Metarhizium guizhouense MGU_02157 I 0.439
MAJ_04030 Metarhizium majus MAJ_04030 I 0.439
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.439
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.437
POPTR_0017s11460 Populus trichocarpa POPTR_0017s11460 I 0.434
A1O9_00742 Exophiala aquamarina A1O9_00742 I 0.434
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.432
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.432
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.432
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.432
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.431
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.425
M7I_1578 Glarea lozoyensis M7I_1578 I 0.425
MBM_02410 Marssonina brunnea MBM_02410 I 0.425
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.425
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.424
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.424
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.424
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.423
CBG09136 Caenorhabditis briggsae CBG09136 N 0.423
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.417